RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 BNIP1Q12981 228 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 PRPSAP1Q14558 356 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 KCTD21Q4G0X4 260 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 CLEC4GQ6UXB4 293 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 PPP1R16BQ96T49 567 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 C10orf88Q9H8K7 445 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 UBE4BO95155 1302 aa13.15□□□□□ -0.31
SSX2IP-201ENST00000342203 SRGAP2CP0DJJ0 459 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 SNX16P57768 344 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 ROR1Q01973 937 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 GRAPQ13588 217 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 PRKG1Q13976 671 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 ZNF268Q14587 947 aaPredicted RBP13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 R3HDM1Q15032 1099 aaKnown RBP13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 VGLL2Q8N8G2 317 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 GRAPLQ8TC17 118 aaPredicted RBP13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 HES6Q96HZ4 224 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 ADPGKQ9BRR6 497 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 SPDYE5A6NIY4 337 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 BMPR2Q13873 1038 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 RCOR2Q8IZ40 523 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 ZNF483Q8TF39 744 aaPredicted RBP13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 HEXIM2Q96MH2 286 aaKnown RBP13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 HAUS8Q9BT25 410 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 TCRBV7S2A1N4TA0A589 114 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 KCNN4O15554 427 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 CALB1P05937 261 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 TFDP2Q14188 446 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 ACAD10Q6JQN1 1059 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 RBM46Q8TBY0 533 aaKnown RBP13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 DNAJC19Q96DA6 116 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 GPRC5CQ9NQ84 441 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 GTSE1Q9NYZ3 720 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 PACSIN3Q9UKS6 424 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 MSH4O15457 936 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 GJB6O95452 261 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 P4HBP07237 508 aaKnown RBP13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 TPP2P29144 1249 aaPredicted RBP13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 MTMR2Q13614 643 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 SLC12A1Q13621 1099 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 C16orf86Q6ZW13 317 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 ARHGEF19Q8IW93 802 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 CDAN1Q8IWY9 1227 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 RNF148Q8N7C7 305 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 ZSWIM2Q8NEG5 633 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 TOPORSQ9NS56 1045 aaPredicted RBP13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 STX1BP61266 288 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 DLGAP5Q15398 846 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 TCHHL1Q5QJ38 904 aaPredicted RBP13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 APLFQ8IW19 511 aaPredicted RBP13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 DRC3Q9H069 523 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 TMEM165Q9HC07 324 aa13.14□□□□□ -0.31
SSX2IP-201ENST00000342203 SNRPAP09012 282 aaKnown RBP13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 COPAP53621 1224 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 ZBTB17Q13105 803 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 NFIXQ14938 502 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 PLA2G4FQ68DD2 849 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 CCNJLQ8IV13 435 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 SPATA18Q8TC71 538 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 AURKCQ9UQB9 309 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 TISP43B9A030 160 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 RAD17O75943 681 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 KRT7P08729 469 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 CENPCQ03188 943 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 MTMR1Q13613 665 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 ZBTB8OSQ8IWT0 167 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 SIKE1Q9BRV8 207 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 SPATA31A3Q5VYP0 1347 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 H0YCG3 227 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 NT5C2P49902 561 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 EXT2Q93063 718 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 FOXP3Q9BZS1 431 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 PCDHB2Q9Y5E7 798 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 C6orf89Q6UWU4 347 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 TAS1R2Q8TE23 839 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 INPP5DQ92835 1189 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 KCNK16Q96T55 309 aa13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 DENND2DQ9H6A0 471 aaPredicted RBP13.13□□□□□ -0.31
SSX2IP-201ENST00000342203 TPST1O60507 370 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 KRT3P12035 628 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 PRKCIP41743 596 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 GCLCP48506 637 aaPredicted RBP13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 TMED10P49755 219 aaKnown RBP13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 IGBP1P78318 339 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 ACAD11Q709F0 780 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 GCNAQ96QF7 691 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 DCLK3Q9C098 648 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 RIMS1Q86UR5 1692 aaKnown RBP13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 NTSR2O95665 410 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 PCYT1AP49585 367 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 RNF43Q68DV7 783 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 CCDC33Q8N5R6 958 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 EFCAB3Q8N7B9 438 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 EZH1Q92800 747 aaPredicted RBP13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 ZNF570Q96NI8 536 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 NDNQ99608 321 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 C12orf65Q9H3J6 166 aaKnown RBP13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 KCNQ2O43526 872 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 GRAP2O75791 330 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 ETS1P14921 441 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms