RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SMIM10L2AP0DMW4 78 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 SMIM10L2BP0DMW5 78 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 KIZQ2M2Z5 673 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 PDXDC1Q6P996 788 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 RUFY4Q6ZNE9 571 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 PLEKHG4BQ96PX9 1271 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 TCHPQ9BT92 498 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 CDHR5Q9HBB8 845 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 ZSCAN9O15535 394 aaPredicted RBP16.06■□□□□ 0.16
BRAT1-201ENST00000340611 PJA2O43164 708 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 TNFSF9P41273 254 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 ALCAMQ13740 583 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 ASTE1Q2TB18 679 aaPredicted RBP16.06■□□□□ 0.16
BRAT1-201ENST00000340611 HGSNATQ68CP4 663 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 ERICH1Q86X53 443 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 YIPF2Q9BWQ6 316 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 PACSIN1Q9BY11 444 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 GCNT4Q9P109 453 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 EXOC7Q9UPT5 735 aa16.06■□□□□ 0.16
BRAT1-201ENST00000340611 SLC16A3O15427 465 aaKnown RBP16.05■□□□□ 0.16
BRAT1-201ENST00000340611 AKR1A1P14550 325 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 BYSLQ13895 437 aaKnown RBP16.05■□□□□ 0.16
BRAT1-201ENST00000340611 MFSD10Q14728 455 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 TAF11Q15544 211 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 DNAAF5Q86Y56 855 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 ARL10Q8N8L6 244 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 CPB2Q96IY4 423 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.05■□□□□ 0.16
BRAT1-201ENST00000340611 TSPYL2Q9H2G4 693 aaPredicted RBP16.05■□□□□ 0.16
BRAT1-201ENST00000340611 MMADHCQ9H3L0 296 aaPredicted RBP16.05■□□□□ 0.16
BRAT1-201ENST00000340611 STK38LQ9Y2H1 464 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 GPR25O00155 361 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 TREHO43280 583 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 MSCO60682 206 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 PON1P27169 355 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 VAMP7P51809 220 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 KIF22Q14807 665 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 TMEM132AQ24JP5 1023 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 MFSD4BQ5TF39 518 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 MFSD14CQ5VZR4 134 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 IFT122Q9HBG6 1241 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 GOLGA6L10A6NI86 522 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 HMGB1P1B2RPK0 211 aaPredicted RBP16.05■□□□□ 0.16
BRAT1-201ENST00000340611 F2P00734 622 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 PRKCBP05771 671 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 FMO5P49326 533 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 EXOC3L4Q17RC7 722 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 ZNF484Q5JVG2 852 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 EEF1DP3Q658K8 133 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 SLC9A9Q8IVB4 645 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 ZNF296Q8WUU4 475 aaPredicted RBP16.05■□□□□ 0.16
BRAT1-201ENST00000340611 NLRP7Q8WX94 980 aa16.05■□□□□ 0.16
BRAT1-201ENST00000340611 ATP6V1G1O75348 118 aa16.04■□□□□ 0.16
BRAT1-201ENST00000340611 BRDTQ58F21 947 aaPredicted RBP16.04■□□□□ 0.16
BRAT1-201ENST00000340611 NUGGCQ68CJ6 796 aa16.04■□□□□ 0.16
BRAT1-201ENST00000340611 KIAA0319LQ8IZA0 1049 aa16.04■□□□□ 0.16
BRAT1-201ENST00000340611 METTL14Q9HCE5 456 aaKnown RBP16.04■□□□□ 0.16
BRAT1-201ENST00000340611 A6NHS1 94 aa16.04■□□□□ 0.16
BRAT1-201ENST00000340611 HOXD8P13378 290 aaPredicted RBP16.04■□□□□ 0.16
BRAT1-201ENST00000340611 HSD17B3P37058 310 aa16.04■□□□□ 0.16
BRAT1-201ENST00000340611 MAGEA8P43361 318 aa16.04■□□□□ 0.16
BRAT1-201ENST00000340611 CUL3Q13618 768 aa16.04■□□□□ 0.16
BRAT1-201ENST00000340611 DBN1Q16643 649 aa16.04■□□□□ 0.16
BRAT1-201ENST00000340611 CD302Q8IX05 232 aa16.04■□□□□ 0.16
BRAT1-201ENST00000340611 TMEM192Q8IY95 271 aa16.04■□□□□ 0.16
BRAT1-201ENST00000340611 MREGQ8N565 214 aa16.04■□□□□ 0.16
BRAT1-201ENST00000340611 CCT6BQ92526 530 aa16.04■□□□□ 0.16
BRAT1-201ENST00000340611 MSTO1Q9BUK6 570 aa16.04■□□□□ 0.16
BRAT1-201ENST00000340611 UBE2OQ9C0C9 1292 aaKnown RBP16.04■□□□□ 0.16
BRAT1-201ENST00000340611 TMBIM4Q9HC24 238 aa16.04■□□□□ 0.16
BRAT1-201ENST00000340611 PTPRJQ12913 1337 aa16.04■□□□□ 0.16
BRAT1-201ENST00000340611 LRRD1A4D1F6 860 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 IMPDH2P12268 514 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 KRT13P13646 458 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 PSEN2P49810 448 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 KCNJ2P63252 427 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 RAPGEF1Q13905 1077 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 MXD4Q14582 209 aaPredicted RBP16.03■□□□□ 0.16
BRAT1-201ENST00000340611 GKAP1Q5VSY0 366 aaPredicted RBP16.03■□□□□ 0.16
BRAT1-201ENST00000340611 CRELD2Q6UXH1 353 aaPredicted RBP16.03■□□□□ 0.16
BRAT1-201ENST00000340611 THNSL1Q8IYQ7 743 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 WHAMMQ8TF30 809 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 DNAJB3Q8WWF6 145 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 CCDC113Q9H0I3 377 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 RNF19AQ9NV58 838 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.03■□□□□ 0.16
BRAT1-201ENST00000340611 AGO2Q9UKV8 859 aaKnown RBP16.03■□□□□ 0.16
BRAT1-201ENST00000340611 DNAJC8O75937 253 aaPredicted RBP16.03■□□□□ 0.16
BRAT1-201ENST00000340611 MYZAPP0CAP1 466 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 PURAQ00577 322 aaKnown RBP16.03■□□□□ 0.16
BRAT1-201ENST00000340611 NFIL3Q16649 462 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 ANKRD20A2Q5SQ80 823 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 ANKRD20A1Q5TYW2 823 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 ANKRD20A3Q5VUR7 823 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 DPY19L2P1Q6NXN4 242 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 RNF10Q8N5U6 811 aaKnown RBP16.03■□□□□ 0.16
BRAT1-201ENST00000340611 AP1M1Q9BXS5 423 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 SRRDQ9UH36 339 aa16.03■□□□□ 0.16
BRAT1-201ENST00000340611 KCNK3O14649 394 aa16.02■□□□□ 0.16
BRAT1-201ENST00000340611 CPT1AP50416 773 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms