RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.23■□□□□ 0.19
LIMK2-203ENST00000340552 SNRNP27Q8WVK2 155 aaKnown RBP16.23■□□□□ 0.19
LIMK2-203ENST00000340552 SPIRE2Q8WWL2 714 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 GYG2O15488 501 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 CFAP157Q5JU67 520 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 NBPF12Q5TAG4 269 aaPredicted RBP16.22■□□□□ 0.19
LIMK2-203ENST00000340552 RHBDF2Q6PJF5 856 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 OTOAQ7RTW8 1153 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 SATL1Q86VE3 508 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 RNF168Q8IYW5 571 aaPredicted RBP16.22■□□□□ 0.19
LIMK2-203ENST00000340552 SCYL3Q8IZE3 742 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 NME8Q8N427 588 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 DENND1AQ8TEH3 1009 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 MCUR1Q96AQ8 359 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 PWWP2AQ96N64 755 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 KCTD10Q9H3F6 313 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 NPHS2Q9NP85 383 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 TUBGCP4Q9UGJ1 667 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 ALG6Q9Y672 507 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 THAP12O43422 761 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 CDH16O75309 829 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 FGFR1P11362 822 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 SULT2A1Q06520 285 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 TMEM119Q4V9L6 283 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 RINLQ6ZS11 566 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 RGS9BPQ6ZS82 235 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 SLFN12Q8IYM2 578 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 ANKRD35Q8N283 1001 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 THAP2Q9H0W7 228 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 NINJ2Q9NZG7 142 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 KANSL3Q9P2N6 904 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 ACTL7BQ9Y614 415 aa16.22■□□□□ 0.19
LIMK2-203ENST00000340552 ATP9BO43861 1147 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 SUPT3HO75486 399 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 ERFP50548 548 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 TMED2Q15363 201 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 ECM1Q16610 540 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 PDK4Q16654 411 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 FNBP1Q96RU3 617 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 EURLQ9NYK6 297 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 CFAP69A5D8W1 941 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 FAM86B1E9PN63 330 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 FAM86B2P0C5J1 330 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 CDC16Q13042 620 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 CYP1B1Q16678 543 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 TCERG1LQ5VWI1 586 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 VPS52Q8N1B4 723 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 PDCD7Q8N8D1 485 aaKnown RBP16.21■□□□□ 0.19
LIMK2-203ENST00000340552 ETNPPLQ8TBG4 499 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 SCFD1Q8WVM8 642 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 TAS2R14Q9NYV8 317 aa16.21■□□□□ 0.19
LIMK2-203ENST00000340552 MRPL11Q9Y3B7 192 aaKnown RBP16.21■□□□□ 0.19
LIMK2-203ENST00000340552 OPHN1O60890 802 aa16.21■□□□□ 0.18
LIMK2-203ENST00000340552 POLR2MP0CAP2 368 aa16.21■□□□□ 0.18
LIMK2-203ENST00000340552 HARSP12081 509 aaKnown RBP16.21■□□□□ 0.18
LIMK2-203ENST00000340552 SPARCL1Q14515 664 aa16.21■□□□□ 0.18
LIMK2-203ENST00000340552 EPHA7Q15375 998 aa16.21■□□□□ 0.18
LIMK2-203ENST00000340552 ZNF554Q86TJ5 538 aa16.21■□□□□ 0.18
LIMK2-203ENST00000340552 LDHDQ86WU2 507 aa16.21■□□□□ 0.18
LIMK2-203ENST00000340552 ZC3H3Q8IXZ2 948 aaKnown RBP16.21■□□□□ 0.18
LIMK2-203ENST00000340552 LENG9Q96B70 501 aa16.21■□□□□ 0.18
LIMK2-203ENST00000340552 PRR11Q96HE9 360 aaPredicted RBP16.21■□□□□ 0.18
LIMK2-203ENST00000340552 EBF3Q9H4W6 596 aa16.21■□□□□ 0.18
LIMK2-203ENST00000340552 ANGPTL2Q9UKU9 493 aa16.21■□□□□ 0.18
LIMK2-203ENST00000340552 TBX3O15119 743 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 MAGEB3O15480 346 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 ZWINTO95229 277 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 ANPEPP15144 967 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 NR2F2P24468 414 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 CIITAP33076 1130 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 SIX1Q15475 284 aaPredicted RBP16.2■□□□□ 0.18
LIMK2-203ENST00000340552 ANGEL2Q5VTE6 544 aaKnown RBP16.2■□□□□ 0.18
LIMK2-203ENST00000340552 PHLDB3Q6NSJ2 640 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 CATSPER2Q96P56 530 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 GINM1Q9NU53 330 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 TAS2R1Q9NYW7 299 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 WHRNQ9P202 907 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 PCDHA2Q9Y5H9 948 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 KDM3AQ9Y4C1 1321 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 TMEM110-MUSTN1A8MSY1 372 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 WDR46O15213 610 aaKnown RBP16.2■□□□□ 0.18
LIMK2-203ENST00000340552 PYGMP11217 842 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 CRABP2P29373 138 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 ZNF76P36508 570 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 CACNB1Q02641 598 aaPredicted RBP16.2■□□□□ 0.18
LIMK2-203ENST00000340552 KLC3Q6P597 504 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 PALB2Q86YC2 1186 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 MAML1Q92585 1016 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 LPAR1Q92633 364 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 PPP2R3CQ969Q6 453 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 ZNF653Q96CK0 615 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 HAUS1Q96CS2 278 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 ZSWIM1Q9BR11 485 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 DCTN4Q9UJW0 460 aa16.2■□□□□ 0.18
LIMK2-203ENST00000340552 HAUS5O94927 633 aa16.19■□□□□ 0.18
LIMK2-203ENST00000340552 CYP3A4P08684 503 aa16.19■□□□□ 0.18
LIMK2-203ENST00000340552 HOXA7P31268 230 aaPredicted RBP16.19■□□□□ 0.18
LIMK2-203ENST00000340552 STAT3P40763 770 aa16.19■□□□□ 0.18
LIMK2-203ENST00000340552 KRT17Q04695 432 aa16.19■□□□□ 0.18
LIMK2-203ENST00000340552 TMED1Q13445 227 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms