RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 GAS2O43903 313 aaKnown RBP3.45□□□□□ -1.86
CSMD3-202ENST00000339701 ATG13O75143 517 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 H2AFZP0C0S5 128 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 RALAP11233 206 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 NUP62P37198 522 aaPredicted RBP3.45□□□□□ -1.86
CSMD3-202ENST00000339701 MTHFD1LQ6UB35 978 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 H2AFVQ71UI9 128 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 CRLF3Q8IUI8 442 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 MAPKAPK5Q8IW41 473 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 COG1Q8WTW3 980 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 ZFRQ96KR1 1074 aaKnown RBP3.45□□□□□ -1.86
CSMD3-202ENST00000339701 PPP1R16BQ96T49 567 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 WWP1Q9H0M0 922 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 FAM49AQ9H0Q0 323 aaPredicted RBP3.45□□□□□ -1.86
CSMD3-202ENST00000339701 MYLK2Q9H1R3 596 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 GID8Q9NWU2 228 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 C17orf102A2RUQ5 167 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 GRXCR2A6NFK2 248 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 ZSCAN5CA6NGD5 496 aaPredicted RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 LRRIQ4A6NIV6 560 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 EXOC3O60645 756 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 RPS6KA5O75582 802 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 MYO1DO94832 1006 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 ZBTB48P10074 688 aaPredicted RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 GRK2P25098 689 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 DPP6P42658 865 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 NKX1-1Q15270 411 aaPredicted RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 MMEL1Q495T6 779 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 SFMBT2Q5VUG0 894 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 C16orf59Q7L2K0 433 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 DNAAF5Q86Y56 855 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 REXO1Q8N1G1 1221 aaKnown RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 AFG1LQ8WV93 481 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 DCLK3Q9C098 648 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 OSBPL5Q9H0X9 879 aaPredicted RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 ADNPQ9H2P0 1102 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 TLK1Q9UKI8 766 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 ZNF451Q9Y4E5 1061 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 LTBP4Q8N2S1 1624 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 PIK3R2O00459 728 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 KRT75O95678 551 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 PSAPP07602 524 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 GHRP10912 638 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 VCLP18206 1134 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 SERPINB1P30740 379 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 PHKA2P46019 1235 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 C1DQ13901 141 aaKnown RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 KRT81Q14533 505 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 ZSCAN23Q3MJ62 389 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 KCTD21Q4G0X4 260 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 GPR158Q5T848 1215 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 XRRA1Q6P2D8 792 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 DCLK2Q8N568 766 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 TDRD5Q8NAT2 981 aaKnown RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 PDZD8Q8NEN9 1154 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 PIGBQ92521 554 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 TSPAN17Q96FV3 270 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 NAF1Q96HR8 494 aaKnown RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 FOXP1Q9H334 677 aaPredicted RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 WBP11Q9Y2W2 641 aaKnown RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 AFG3L2Q9Y4W6 797 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 METTL21EPA6NDL7 271 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 TNFAIP3P21580 790 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 GARTP22102 1010 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 ADCY8P40145 1251 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 BTDP43251 543 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 UBE3CQ15386 1083 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 TRIP4Q15650 581 aaPredicted RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 PADI6Q6TGC4 694 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 PIK3AP1Q6ZUJ8 805 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 IGSF22Q8N9C0 903 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 ZNF248Q8NDW4 579 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 EPB41L5Q9HCM4 733 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 HMG20AQ9NP66 347 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 SLC38A7Q9NVC3 462 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 C6orf203Q9P0P8 240 aaPredicted RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 CTNNAL1Q9UBT7 734 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 LNPEPQ9UIQ6 1025 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 HPS5Q9UPZ3 1129 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 PCDHB3Q9Y5E6 796 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 LAMTOR5O43504 91 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 CIAO1O76071 339 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 TJP3O95049 919 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 GH1P01241 217 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 PCCAP05165 728 aaPredicted RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 CALB1P05937 261 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 SYPP08247 313 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 GSTA1P08263 222 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 IL10P22301 178 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 MRPS5P82675 430 aaKnown RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 KLHL30Q0D2K2 578 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 LRMPQ12912 555 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 SARM1Q6SZW1 724 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 ACAD11Q709F0 780 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 NOA1Q8NC60 698 aaKnown RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 HSPH1Q92598 858 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 FAM162AQ96A26 154 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 TRERF1Q96PN7 1200 aa3.44□□□□□ -1.86
CSMD3-202ENST00000339701 NOC4LQ9BVI4 516 aaKnown RBP3.44□□□□□ -1.86
CSMD3-202ENST00000339701 NUSAP1Q9BXS6 441 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms