RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 KCNJ1P48048 391 aa13.3□□□□□ -0.28
DFFB-202ENST00000339350 VPS41P49754 854 aa13.3□□□□□ -0.28
DFFB-202ENST00000339350 BCL2A1Q16548 175 aa13.3□□□□□ -0.28
DFFB-202ENST00000339350 PPP4R3CPQ6ZMV5 832 aa13.3□□□□□ -0.28
DFFB-202ENST00000339350 SLFN11Q7Z7L1 901 aa13.3□□□□□ -0.28
DFFB-202ENST00000339350 RASGEF1CQ8N431 466 aa13.3□□□□□ -0.28
DFFB-202ENST00000339350 FBXO41Q8TF61 875 aa13.3□□□□□ -0.28
DFFB-202ENST00000339350 SH2D3AQ9BRG2 576 aa13.3□□□□□ -0.28
DFFB-202ENST00000339350 STK33Q9BYT3 514 aa13.3□□□□□ -0.28
DFFB-202ENST00000339350 TPK1Q9H3S4 243 aa13.3□□□□□ -0.28
DFFB-202ENST00000339350 SLITRK6Q9H5Y7 841 aa13.3□□□□□ -0.28
DFFB-202ENST00000339350 TCRBV7S2A1N4TA0A589 114 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 KANSL1LA0AUZ9 987 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 PDXKO00764 312 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 BIRC5O15392 142 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 MSH4O15457 936 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 BBOX1O75936 387 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 SOX5P35711 763 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 POU5F1Q01860 360 aaKnown RBP13.29□□□□□ -0.28
DFFB-202ENST00000339350 EPM2AIP1Q7L775 607 aaPredicted RBP13.29□□□□□ -0.28
DFFB-202ENST00000339350 ZC3H3Q8IXZ2 948 aaKnown RBP13.29□□□□□ -0.28
DFFB-202ENST00000339350 LSM14AQ8ND56 463 aaKnown RBP13.29□□□□□ -0.28
DFFB-202ENST00000339350 OLIG1Q8TAK6 271 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 FNDC8Q8TC99 324 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 POP1Q99575 1024 aaKnown RBP13.29□□□□□ -0.28
DFFB-202ENST00000339350 MAK16Q9BXY0 300 aaKnown RBP13.29□□□□□ -0.28
DFFB-202ENST00000339350 EPB41L4BQ9H329 900 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 PCIF1Q9H4Z3 704 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 KRT82Q9NSB4 513 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 PRKAG3Q9UGI9 489 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 RABGAP1Q9Y3P9 1069 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 CCDC160A6NGH7 325 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 FBP2O00757 339 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 KDM1AO60341 852 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 ECE2O60344 883 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 FAM13AO94988 1023 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 TNFAIP3P21580 790 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 SLFN13Q68D06 897 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 DSTYKQ6XUX3 929 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 JAMLQ86YT9 394 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 SYCE1Q8N0S2 351 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 CCDC127Q96BQ5 260 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 CCT7Q99832 543 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 EIF2AK1Q9BQI3 630 aaKnown RBP13.29□□□□□ -0.28
DFFB-202ENST00000339350 PTTG2Q9NZH5 202 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 PKD2L1Q9P0L9 805 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 DKK3Q9UBP4 350 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 TBC1D30Q9Y2I9 924 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 CENPFP49454 3210 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 GAKO14976 1311 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 PITPNM2Q9BZ72 1349 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 ATAD5Q96QE3 1844 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 ANKRD63C9JTQ0 380 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 CES2O00748 559 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 WDR46O15213 610 aaKnown RBP13.29□□□□□ -0.28
DFFB-202ENST00000339350 ADCY3O60266 1144 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 ENPP1P22413 925 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 RPA1P27694 616 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 HOXD10P28358 340 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 TMED10P49755 219 aaKnown RBP13.29□□□□□ -0.28
DFFB-202ENST00000339350 SLC34A1Q06495 639 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 GPR162Q16538 588 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 GPATCH4Q5T3I0 446 aaKnown RBP13.29□□□□□ -0.28
DFFB-202ENST00000339350 ZDHHC14Q8IZN3 488 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 GABPB2Q8TAK5 448 aaPredicted RBP13.29□□□□□ -0.28
DFFB-202ENST00000339350 GDAP1Q8TB36 358 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 PRPF31Q8WWY3 499 aaKnown RBP13.29□□□□□ -0.28
DFFB-202ENST00000339350 ARHGEF2Q92974 986 aaKnown RBP13.29□□□□□ -0.28
DFFB-202ENST00000339350 LENG9Q96B70 501 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 SLC7A6OSQ96CW6 309 aaPredicted RBP13.29□□□□□ -0.28
DFFB-202ENST00000339350 DNAJC18Q9H819 358 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 FADS3Q9Y5Q0 445 aa13.29□□□□□ -0.28
DFFB-202ENST00000339350 LY75O60449 1722 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 COL24A1Q17RW2 1714 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 MYO3BQ8WXR4 1341 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 FOXN3O00409 490 aaPredicted RBP13.28□□□□□ -0.28
DFFB-202ENST00000339350 RNASEH1O60930 286 aaKnown RBP13.28□□□□□ -0.28
DFFB-202ENST00000339350 RXRBP28702 533 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 FMO5P49326 533 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 RELAQ04206 551 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 AP1B1Q10567 949 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 MESDQ14696 234 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 DENND2CQ68D51 928 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 RINT1Q6NUQ1 792 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 NEPROQ6NW34 567 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 PPP1R18Q6NYC8 613 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 SLFN12Q8IYM2 578 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 RFFLQ8WZ73 363 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 IRGQQ8WZA9 623 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 MAML3Q96JK9 1138 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 ERP44Q9BS26 406 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 SEZ6LQ9BYH1 1024 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 NENFQ9UMX5 172 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 ADAMTSL1Q8N6G6 1762 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 TRIM64CA6NLI5 447 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 CBX6O95503 412 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 ADRA2BP18089 450 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 NT5C2P49902 561 aa13.28□□□□□ -0.28
DFFB-202ENST00000339350 EIF3BP55884 814 aaKnown RBP13.28□□□□□ -0.28
DFFB-202ENST00000339350 DLG4P78352 724 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms