RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 PRRG1O14668 218 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 PPEF2O14830 753 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 HUS1O60921 280 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 GADD45BO75293 160 aaPredicted RBP12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 C8AP07357 584 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 CPB1P15086 417 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 HOXA9P31269 272 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 ROR1Q01973 937 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 BFSP1Q12934 665 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 NFIL3Q16649 462 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 CEP135Q66GS9 1140 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 C1orf127Q8N9H9 656 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 SMG7Q92540 1137 aaKnown RBP12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 ACSF2Q96CM8 615 aaPredicted RBP12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 RPGRIP1Q96KN7 1286 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 MFSD14AQ96MC6 490 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 GBP4Q96PP9 640 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 CGRRF1Q99675 332 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 TSG101Q99816 390 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 PRKD2Q9BZL6 878 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 DMAC2Q9NW81 257 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 PCDHA5Q9Y5H7 936 aa12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 TIMM13Q9Y5L4 95 aaPredicted RBP12.2□□□□□ -0.46
SLC28A1-202ENST00000338602 C19orf67A6NJJ6 358 aa12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 SPTLC1O15269 473 aa12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 ADAM12O43184 909 aa12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 TBC1D4O60343 1298 aa12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 GPR37L1O60883 481 aa12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 PHACTR2O75167 634 aa12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 RFPL2O75678 378 aa12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 ABLIM3O94929 683 aa12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 CYP11A1P05108 521 aa12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 NR2F2P24468 414 aa12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 TRPC3Q13507 836 aa12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 LMBRD2Q68DH5 695 aaPredicted RBP12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 RSPO2Q6UXX9 243 aaPredicted RBP12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 PLCD3Q8N3E9 789 aa12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 SPATA20Q8TB22 786 aa12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 SLC7A14Q8TBB6 771 aa12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 CYP4F11Q9HBI6 524 aa12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 AFF4Q9UHB7 1163 aaKnown RBP12.19□□□□□ -0.46
SLC28A1-202ENST00000338602 LOC730098B7Z3J9 87 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 GOLGA6L22H0YM25 854 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 CETN3O15182 167 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 MAPK13O15264 365 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 LRG1P02750 347 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 WEE2P0C1S8 567 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 KRT13P13646 458 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 ATF2P15336 505 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 PSMC2P35998 433 aaKnown RBP12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 WNT7BP56706 349 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 SMARCB1Q12824 385 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 ADAM9Q13443 819 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 EDRF1Q3B7T1 1238 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 COBLL1Q53SF7 1204 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 DPH6Q7L8W6 267 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 OTOP3Q7RTS5 596 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 TRAPPC11Q7Z392 1133 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 TMEM86AQ8N2M4 240 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 ELMOD1Q8N336 334 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 TMEM130Q8N3G9 435 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 TDRD5Q8NAT2 981 aaKnown RBP12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 OR5B17Q8NGF7 314 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 SPATA18Q8TC71 538 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 HPDLQ96IR7 371 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 POMKQ9H5K3 350 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 POLIQ9UNA4 740 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 USTQ9Y2C2 406 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 ANK1P16157 1881 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 VWA8A3KMH1 1905 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 WDR27A2RRH5 827 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 PSMA7O14818 248 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 CLSTN1O94985 981 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 PAPLNO95428 1278 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 POU2F2P09086 479 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 ALADP13716 330 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 ATICP31939 592 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 MYL7Q01449 175 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 TSPY1Q01534 308 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 ADCY1Q08828 1119 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 GPR17Q13304 367 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 PLD1Q13393 1074 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 BIRC3Q13489 604 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 WSCD1Q658N2 575 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 INTS8Q75QN2 995 aaKnown RBP12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 FAM186BQ8IYM0 893 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 TCEAL8Q8IYN2 117 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 SMYD4Q8IYR2 804 aaPredicted RBP12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 DCP1BQ8IZD4 617 aaKnown RBP12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 TOP6BLQ8N6T0 577 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 TMC2Q8TDI7 906 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 PARD3BQ8TEW8 1205 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 SYAP1Q96A49 352 aaPredicted RBP12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 WDR6Q9NNW5 1121 aaKnown RBP12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 GDAP2Q9NXN4 497 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 SNX9Q9Y5X1 595 aa12.18□□□□□ -0.46
SLC28A1-202ENST00000338602 IKBKBO14920 756 aa12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 EPB41P11171 864 aaKnown RBP12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 PRCPP42785 496 aa12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 LHX1P48742 406 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms