RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 DSTYKQ6XUX3 929 aa16.49■□□□□ 0.23
PRKN-201ENST00000338468 CCDC149Q6ZUS6 474 aa16.49■□□□□ 0.23
PRKN-201ENST00000338468 DOCK6Q96HP0 2047 aa16.49■□□□□ 0.23
PRKN-201ENST00000338468 KCTD10Q9H3F6 313 aa16.49■□□□□ 0.23
PRKN-201ENST00000338468 SIX4Q9UIU6 781 aa16.49■□□□□ 0.23
PRKN-201ENST00000338468 CLUHO75153 1309 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 CCL16O15467 120 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 RHOBTB3O94955 611 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 ITGB3P05106 788 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 CYP11A1P05108 521 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 POU2F2P09086 479 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 ATF2P15336 505 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 PAX3P23760 479 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 POLR2BP30876 1174 aaKnown RBP16.48■□□□□ 0.23
PRKN-201ENST00000338468 TAF6P49848 677 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 CYP2J2P51589 502 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 SNRNP35Q16560 246 aaKnown RBP16.48■□□□□ 0.23
PRKN-201ENST00000338468 UVSSAQ2YD98 709 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 PPM1LQ5SGD2 360 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 HS2ST1Q7LGA3 356 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 ZDHHC14Q8IZN3 488 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 XXYLT1Q8NBI6 393 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 OR5B17Q8NGF7 314 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 RTP3Q9BQQ7 232 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 MTMR12Q9C0I1 747 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 KIAA1586Q9HCI6 787 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 INTS13Q9NVM9 706 aa16.48■□□□□ 0.23
PRKN-201ENST00000338468 CIZ1Q9ULV3 898 aaPredicted RBP16.48■□□□□ 0.23
PRKN-201ENST00000338468 MYO15AQ9UKN7 3530 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 NOTCH4Q99466 2003 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 ARHGEF37A1IGU5 675 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 H0Y858 1186 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 OR4Q2P0C623 313 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 ODC1P11926 461 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 NTHL1P78549 312 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 TPGS2Q68CL5 300 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 OVOS1Q6IE37 1185 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 RNF19BQ6ZMZ0 732 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 RTL10Q7L3V2 364 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 TCEAL8Q8IYN2 117 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 TDRD5Q8NAT2 981 aaKnown RBP16.47■□□□□ 0.23
PRKN-201ENST00000338468 RDH13Q8NBN7 331 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 TMEM174Q8WUU8 243 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 MYADMQ96S97 322 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 TMEM209Q96SK2 561 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 PIDD1Q9HB75 910 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 DMAC2Q9NW81 257 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 CGNQ9P2M7 1197 aaKnown RBP16.47■□□□□ 0.23
PRKN-201ENST00000338468 AGAP1Q9UPQ3 857 aa16.47■□□□□ 0.23
PRKN-201ENST00000338468 DOCK8Q8NF50 2099 aa16.46■□□□□ 0.23
PRKN-201ENST00000338468 KPNA7A9QM74 516 aa16.46■□□□□ 0.23
PRKN-201ENST00000338468 TULP1O00294 542 aaPredicted RBP16.46■□□□□ 0.23
PRKN-201ENST00000338468 CYB561D2O14569 222 aa16.46■□□□□ 0.23
PRKN-201ENST00000338468 GALR2O43603 387 aaPredicted RBP16.46■□□□□ 0.23
PRKN-201ENST00000338468 CYP24A1Q07973 514 aa16.46■□□□□ 0.23
PRKN-201ENST00000338468 MTMR3Q13615 1198 aa16.46■□□□□ 0.23
PRKN-201ENST00000338468 KCNB1Q14721 858 aa16.46■□□□□ 0.23
PRKN-201ENST00000338468 PSMD6Q15008 389 aa16.46■□□□□ 0.23
PRKN-201ENST00000338468 OTOP3Q7RTS5 596 aa16.46■□□□□ 0.23
PRKN-201ENST00000338468 GRASPQ7Z6J2 395 aaPredicted RBP16.46■□□□□ 0.23
PRKN-201ENST00000338468 USP37Q86T82 979 aa16.46■□□□□ 0.23
PRKN-201ENST00000338468 OR10T2Q8NGX3 314 aa16.46■□□□□ 0.23
PRKN-201ENST00000338468 PLEKHO2Q8TD55 490 aa16.46■□□□□ 0.23
PRKN-201ENST00000338468 CACTINQ8WUQ7 758 aaKnown RBP16.46■□□□□ 0.23
PRKN-201ENST00000338468 CRISPLD1Q9H336 500 aa16.46■□□□□ 0.23
PRKN-201ENST00000338468 HCFC1R1Q9NWW0 138 aa16.46■□□□□ 0.23
PRKN-201ENST00000338468 LIMD1Q9UGP4 676 aa16.46■□□□□ 0.23
PRKN-201ENST00000338468 AFF4Q9UHB7 1163 aaKnown RBP16.46■□□□□ 0.23
PRKN-201ENST00000338468 ITGA11Q9UKX5 1188 aa16.46■□□□□ 0.23
PRKN-201ENST00000338468 SPTBN4Q9H254 2564 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 OR6C75A6NL08 312 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 PROB1E7EW31 1015 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 PDGFBP01127 241 aaPredicted RBP16.45■□□□□ 0.22
PRKN-201ENST00000338468 ASGR2P07307 311 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 FAM160A1Q05DH4 1040 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 ADCY1Q08828 1119 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 PNOCQ13519 176 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 SV2CQ496J9 727 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 WSCD1Q658N2 575 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 WDR49Q8IV35 697 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 SLC9A9Q8IVB4 645 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 UBALD2Q8IYN6 164 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 CSGALNACT2Q8N6G5 542 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 LRRC52Q8N7C0 313 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 ZNF516Q92618 1163 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 ZNF560Q96MR9 790 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 OXCT2Q9BYC2 517 aaPredicted RBP16.45■□□□□ 0.22
PRKN-201ENST00000338468 CYP4F11Q9HBI6 524 aa16.45■□□□□ 0.22
PRKN-201ENST00000338468 DNMT3BQ9UBC3 853 aaKnown RBP16.45■□□□□ 0.22
PRKN-201ENST00000338468 MYO10Q9HD67 2058 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 GOLGA6L4A6NEF3 574 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 PDXKO00764 312 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 XYLBO75191 536 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 GADD45BO75293 160 aaPredicted RBP16.44■□□□□ 0.22
PRKN-201ENST00000338468 TMEM191BP0C7N4 346 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 CPB1P15086 417 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 PNPLA4P41247 253 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 RBP5P82980 135 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 GPR17Q13304 367 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 MYBPC2Q14324 1141 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms