RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 DSEQ9UL01 958 aa10.17□□□□□ -0.78
C11orf54-201ENST00000331239 REXO2Q9Y3B8 237 aaKnown RBP10.17□□□□□ -0.78
C11orf54-201ENST00000331239 CCDC85CA6NKD9 419 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 TACC1O75410 805 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 ITGB8P26012 769 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 AARSP49588 968 aaKnown RBP eCLIP10.16□□□□□ -0.78
C11orf54-201ENST00000331239 TAF6P49848 677 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 WDR5P61964 334 aaKnown RBP10.16□□□□□ -0.78
C11orf54-201ENST00000331239 ELAVL2Q12926 359 aaKnown RBP10.16□□□□□ -0.78
C11orf54-201ENST00000331239 SEZ6Q53EL9 994 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 CLLU1OSQ5K130 101 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 DEFB128Q7Z7B8 93 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 TOP6BLQ8N6T0 577 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 TAS1R2Q8TE23 839 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 ZMAT2Q96NC0 199 aaKnown RBP10.16□□□□□ -0.78
C11orf54-201ENST00000331239 CASD1Q96PB1 797 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 POP1Q99575 1024 aaKnown RBP10.16□□□□□ -0.78
C11orf54-201ENST00000331239 LSM14BQ9BX40 385 aaKnown RBP10.16□□□□□ -0.78
C11orf54-201ENST00000331239 BCO2Q9BYV7 579 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 NIF3L1Q9GZT8 377 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 XYLT2Q9H1B5 865 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 AIPL1Q9NZN9 384 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 SIX4Q9UIU6 781 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 KIAA1257Q9ULG3 409 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 RWDD3Q9Y3V2 267 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 PTPRJQ12913 1337 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 NOL4O94818 638 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 ABL1P00519 1130 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 MLH1P40692 756 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 WNT7BP56706 349 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 JAM2P57087 298 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 HTRA4P83105 476 aaPredicted RBP10.16□□□□□ -0.78
C11orf54-201ENST00000331239 MEA1Q16626 185 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 ZNF667Q5HYK9 610 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 TMEM240Q5SV17 173 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 PPP1R2P3Q6NXS1 205 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 CNPY4Q8N129 248 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 TMEM86AQ8N2M4 240 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 MSANTD4Q8NCY6 345 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 BADQ92934 168 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 HPDLQ96IR7 371 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 PCMTD1Q96MG8 357 aaPredicted RBP10.16□□□□□ -0.78
C11orf54-201ENST00000331239 COLEC11Q9BWP8 271 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 HAUS4Q9H6D7 363 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 RC3H2Q9HBD1 1191 aaKnown RBP10.16□□□□□ -0.78
C11orf54-201ENST00000331239 HES2Q9Y543 173 aa10.16□□□□□ -0.78
C11orf54-201ENST00000331239 CTAGE15A4D2H0 777 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 TRAPPC3O43617 180 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 CTAGE8P0CG41 777 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 FERP16591 822 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 BMP8BP34820 402 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 STAT1P42224 750 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 NOP14P78316 857 aaKnown RBP10.15□□□□□ -0.78
C11orf54-201ENST00000331239 UPP1Q16831 310 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 LONRF2Q1L5Z9 754 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 ZNF699Q32M78 642 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 CACNA2D4Q7Z3S7 1137 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 CTAGE6Q86UF2 777 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 UNC93AQ86WB7 457 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 CTAGE4Q8IX94 777 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 HELQQ8TDG4 1101 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 DPF3Q92784 378 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 FAM193BQ96PV7 902 aaPredicted RBP10.15□□□□□ -0.78
C11orf54-201ENST00000331239 APOL6Q9BWW8 343 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 UBXN6Q9BZV1 441 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 ANKZF1Q9H8Y5 726 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 ZNHIT6Q9NWK9 470 aaKnown RBP10.15□□□□□ -0.78
C11orf54-201ENST00000331239 PLAGL2Q9UPG8 496 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 SLC9A1P19634 815 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 TYMPP19971 482 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 PRKCIP41743 596 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 AMPD2Q01433 879 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 CUL2Q13617 745 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 WDR59Q6PJI9 974 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 C16orf59Q7L2K0 433 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 COLGALT2Q8IYK4 626 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 UBR7Q8N806 425 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 SHC3Q92529 594 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 SEMA4DQ92854 862 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 FUT8Q9BYC5 575 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 AAASQ9NRG9 546 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 RAB21Q9UL25 225 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 GUCA1BQ9UMX6 200 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 AGAP1Q9UPQ3 857 aa10.15□□□□□ -0.78
C11orf54-201ENST00000331239 IPO7O95373 1038 aaKnown RBP10.14□□□□□ -0.79
C11orf54-201ENST00000331239 ITGB3P05106 788 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 CYLC1P35663 651 aaPredicted RBP10.14□□□□□ -0.79
C11orf54-201ENST00000331239 KRT83P78385 493 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 INCA1Q0VD86 236 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 PDXDC1Q6P996 788 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 ZNF677Q86XU0 584 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 SP7Q8TDD2 431 aaPredicted RBP10.14□□□□□ -0.79
C11orf54-201ENST00000331239 HNRNPLLQ8WVV9 542 aaKnown RBP10.14□□□□□ -0.79
C11orf54-201ENST00000331239 BAP1Q92560 729 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 TBC1D13Q9NVG8 400 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 TRIM10Q9UDY6 481 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 DNAJC12Q9UKB3 198 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 INSL6Q9Y581 213 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 ATP8B3O60423 1300 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 M0QZQ0 153 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms