RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SV2CQ496J9 727 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 INTS5Q6P9B9 1019 aaKnown RBP11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 C3orf62Q6ZUJ4 267 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 USP33Q8TEY7 942 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 AGAP3Q96P47 875 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 DDX50Q9BQ39 737 aaKnown RBP11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 NIF3L1Q9GZT8 377 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 GOLPH3Q9H4A6 298 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 CDYLQ9Y232 598 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 SALL3Q9BXA9 1300 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 MAP2P11137 1827 aaKnown RBP11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 ADGRB2O60241 1585 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 MAFGO15525 162 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 NLRP11P59045 1033 aaKnown RBP11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 CACNB2Q08289 660 aaPredicted RBP11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 ANO4Q32M45 955 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 UBA3Q8TBC4 463 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 RBM46Q8TBY0 533 aaKnown RBP11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 ARHGEF38Q9NXL2 777 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 CCT8L1PA6NM43 557 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 NPEPPSP55786 919 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 PDAP1Q13442 181 aaKnown RBP11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 CAPRIN2Q6IMN6 1127 aaKnown RBP11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 TAAR1Q96RJ0 339 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 NT5C1AQ9BXI3 368 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 SLC24A3Q9HC58 644 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 TJP2Q9UDY2 1190 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 NEURL4Q96JN8 1562 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 KCNA2P16389 499 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 SMTNL2Q2TAL5 461 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 WDR93Q6P2C0 686 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 GPRASP2Q96D09 838 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 SRP72O76094 671 aaKnown RBP11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 FAM107AO95990 144 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 CCND1P24385 295 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 CUL2Q13617 745 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 KYNUQ16719 465 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 MOXD1Q6UVY6 613 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 SZRD1Q7Z422 152 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 ASIC4Q96FT7 647 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 KAZALD1Q96I82 304 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 PPP1R2P1Q96PQ5 205 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 ASPSCR1Q9BZE9 553 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 CNOT7Q9UIV1 285 aaKnown RBP11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 ANGPT2O15123 496 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 MUTP22033 750 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 SLC13A5Q86YT5 568 aaPredicted RBP11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 ERP27Q96DN0 273 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 TASP1Q9H6P5 420 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 COG4Q9H9E3 785 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 JCADQ9P266 1359 aa11.43□□□□□ -0.58
SNRNP200-201ENST00000323853 MAGEB2O15479 319 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 KLHL2O95198 593 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 PRLRP16471 622 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 IFNA8P32881 189 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 USP10Q14694 798 aaKnown RBP11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 DCAF4L1Q3SXM0 396 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 DAB2IPQ5VWQ8 1189 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 PAPD7Q5XG87 772 aaKnown RBP11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 EFCAB12Q6NXP0 572 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 CHST13Q8NET6 341 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 SPATA18Q8TC71 538 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 KATNAL1Q9BW62 490 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 TMBIM4Q9HC24 238 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 GRAP2O75791 330 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 SNRPAP09012 282 aaKnown RBP11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 HDAC4P56524 1084 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 IER5Q5VY09 327 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 PTPRN2Q92932 1015 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 SPON2Q9BUD6 331 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 FRMD8P1Q9BZ68 369 aaPredicted RBP11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 C20orf96Q9NUD7 363 aaPredicted RBP11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 CHORDC1Q9UHD1 332 aaPredicted RBP11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 TLR2O60603 784 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 ICAM1P05362 532 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 PDGFRBP09619 1106 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 SLC29A2Q14542 456 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 EPC2Q52LR7 807 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 FAM71DQ8N9W8 422 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 SPATA31A5Q5VU36 1347 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 SPATA31A7Q8IWB4 1347 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 MEGF6O75095 1541 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 MYCP01106 439 aaPredicted RBP11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 GIT2Q14161 759 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 C3orf20Q8ND61 904 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 CCDC90BQ9GZT6 254 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 SLC40A1Q9NP59 571 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 PLAGL2Q9UPG8 496 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 PLA2G4AP47712 749 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 ABCE1P61221 599 aaKnown RBP11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 TRIM65Q6PJ69 517 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 TEX12Q9BXU0 123 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 TRIM54Q9BYV2 358 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 AURKCQ9UQB9 309 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 PDK1Q15118 436 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 TTI2Q6NXR4 508 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 DTX3LQ8TDB6 740 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 ZBED2Q9BTP6 218 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms