RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 ASPSCR1Q9BZE9 553 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 ALG13Q9NP73 1137 aaKnown RBP7.39□□□□□ -1.23
SMC1A-201ENST00000322213 XPO7Q9UIA9 1087 aaKnown RBP7.39□□□□□ -1.23
SMC1A-201ENST00000322213 POTECB2RU33 542 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 SNRNP200O75643 2136 aaKnown RBP7.38□□□□□ -1.23
SMC1A-201ENST00000322213 PSMG1O95456 288 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 ALX1Q15699 326 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 LRRC6Q86X45 466 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 PGM2Q96G03 612 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 LRMDAQ9H2I8 198 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 JAG2Q9Y219 1238 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 PNMA6FA0A0J9YX94 578 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 RBM47A0AV96 593 aaKnown RBP7.38□□□□□ -1.23
SMC1A-201ENST00000322213 DNALI1O14645 258 aaPredicted RBP7.38□□□□□ -1.23
SMC1A-201ENST00000322213 LZTS3O60299 673 aaPredicted RBP7.38□□□□□ -1.23
SMC1A-201ENST00000322213 TTKP33981 857 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 CLK1P49759 484 aaKnown RBP7.38□□□□□ -1.23
SMC1A-201ENST00000322213 ERFP50548 548 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 TMPRSS6Q8IU80 811 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 SLC12A4Q9UP95 1085 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 GBF1Q92538 1859 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 ALBP02768 609 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 NUDT2P50583 147 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 LBHD1Q9BQE6 289 aaPredicted RBP7.38□□□□□ -1.23
SMC1A-201ENST00000322213 SPATA7Q9P0W8 599 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 PCDHGC5Q9Y5F6 944 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 VWA5AO00534 786 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 FAM153BP0C7A2 387 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 CCDC130P13994 396 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 LPIN1Q14693 890 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 FAM153CQ494X1 144 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 STOX1Q6ZVD7 989 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 KRT28Q7Z3Y7 464 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 CDH24Q86UP0 819 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 TUBGCP3Q96CW5 907 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 ADAM22Q9P0K1 906 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 DMGDHQ9UI17 866 aaKnown RBP7.38□□□□□ -1.23
SMC1A-201ENST00000322213 PDCD11Q14690 1871 aaKnown RBP7.38□□□□□ -1.23
SMC1A-201ENST00000322213 CACNA1IQ9P0X4 2223 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 SAC3D1A6NKF1 404 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 CLDN3O15551 220 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 SERPINB9P50453 376 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 SLC45A4Q5BKX6 768 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 DEPDC1Q5TB30 811 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 CAAP1Q9H8G2 361 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 CRB1P82279 1406 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 ESPL1Q14674 2120 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 AIM2O14862 343 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 RASSF9O75901 435 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 TRIM49P0CI25 452 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 TRIM49CP0CI26 452 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 YWHAHQ04917 246 aaPredicted RBP7.38□□□□□ -1.23
SMC1A-201ENST00000322213 PROSER3Q2NL68 480 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 ACCSLQ4AC99 568 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 GLMNQ92990 594 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 ZBTB18Q99592 522 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 TMEM120AQ9BXJ8 343 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 TEX12Q9BXU0 123 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 NSMCE4AQ9NXX6 385 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 SLC9A2Q9UBY0 812 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 TFR2Q9UP52 801 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 MCM3APO60318 1980 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.38□□□□□ -1.23
SMC1A-201ENST00000322213 MSL3P1P0C860 447 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 MYL2P10916 166 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 COPB2P35606 906 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 PHKA1P46020 1223 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 XIAPP98170 497 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 C11orf63Q6NUN7 778 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.38□□□□□ -1.23
SMC1A-201ENST00000322213 TTC8Q8TAM2 541 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 ZNF507Q8TCN5 953 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 HEMGNQ9BXL5 484 aa7.38□□□□□ -1.23
SMC1A-201ENST00000322213 PCCAP05165 728 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 OSBPP22059 807 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 CYP4A11Q02928 519 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 MPP3Q13368 585 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 PARP6Q2NL67 630 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 ARMCX4Q5H9R4 360 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 CLEC4FQ8N1N0 589 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 OR6Y1Q8NGX8 325 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 DEPTORQ8TB45 409 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 ANKRD36BP1Q96IX9 119 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 ZFYVE19Q96K21 471 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 PYGMP11217 842 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 PMLP29590 882 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 TRIM25Q14258 630 aaKnown RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 CHI3L2Q15782 390 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 OXNAD1Q96HP4 312 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 OSBPL10Q9BXB5 764 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 RPAP3Q9H6T3 665 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 DAPK2Q9UIK4 370 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 STX7O15400 261 aaKnown RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 CIITAP33076 1130 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 COILP38432 576 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 CEP78Q5JTW2 689 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 GLYCTKQ8IVS8 523 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 CNKSR1Q969H4 720 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 OMA1Q96E52 524 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 OTUD5Q96G74 571 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms