RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 KLHL14Q9P2G3 628 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 STARD13Q9Y3M8 1113 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 COL11A1P12107 1806 aaPredicted RBP9.22□□□□□ -0.93
CLK1-201ENST00000321356 MYH9P35579 1960 aaKnown RBP9.21□□□□□ -0.93
CLK1-201ENST00000321356 TCRBV5S1A1TA0A578 114 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 TLR3O15455 904 aaKnown RBP9.21□□□□□ -0.93
CLK1-201ENST00000321356 UNC5CO95185 931 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 PSAPP07602 524 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 NR3C2P08235 984 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 TNNI1P19237 187 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 MMP8P22894 467 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 TBXAS1P24557 533 aaPredicted RBP9.21□□□□□ -0.93
CLK1-201ENST00000321356 LIG4P49917 911 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 PRKCEQ02156 737 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 MCL1Q07820 350 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 DGKZQ13574 1117 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 BAATQ14032 418 aaPredicted RBP9.21□□□□□ -0.93
CLK1-201ENST00000321356 TMED2Q15363 201 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 EAPPQ56P03 285 aaPredicted RBP9.21□□□□□ -0.93
CLK1-201ENST00000321356 TMEM270Q6UE05 265 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 PRUNE1Q86TP1 453 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 PASD1Q8IV76 773 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 CCDC60Q8IWA6 550 aaPredicted RBP9.21□□□□□ -0.93
CLK1-201ENST00000321356 ALLCQ8N6M5 410 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 UBR7Q8N806 425 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 GLIS1Q8NBF1 620 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 RBBP8NLQ8NC74 664 aaPredicted RBP9.21□□□□□ -0.93
CLK1-201ENST00000321356 AGBL3Q8NEM8 1001 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 FEZF2Q8TBJ5 459 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 TBC1D31Q96DN5 1066 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 RBM41Q96IZ5 413 aaKnown RBP9.21□□□□□ -0.93
CLK1-201ENST00000321356 SLITRK1Q96PX8 696 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 IP6K2Q9UHH9 426 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 KCNG1Q9UIX4 513 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 AGO2Q9UKV8 859 aaKnown RBP9.21□□□□□ -0.93
CLK1-201ENST00000321356 DNPEPQ9ULA0 475 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 DRG1Q9Y295 367 aaKnown RBP9.21□□□□□ -0.93
CLK1-201ENST00000321356 TELO2Q9Y4R8 837 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 PCDHB4Q9Y5E5 795 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 ZNF541Q9H0D2 1346 aa9.21□□□□□ -0.93
CLK1-201ENST00000321356 EXOC1LA0A1B0GW35 172 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 GSTTP1A0A1W2PQM5 241 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 TMEM191CA6NGB0 347 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 VWA5AO00534 786 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 WNT10BO00744 389 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 APBA3O96018 575 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 TMEM191BP0C7N4 346 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 TCF4P15884 667 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 CCND1P24385 295 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 CETN2P41208 172 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 MSH2P43246 934 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 YARSP54577 528 aaKnown RBP9.21□□□□□ -0.94
CLK1-201ENST00000321356 ZNF252P-AS1Q0IIN9 211 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 MOGSQ13724 837 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 MORF4L2Q15014 288 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 OASLQ15646 514 aaKnown RBP9.21□□□□□ -0.94
CLK1-201ENST00000321356 CYP4F22Q6NT55 531 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 SWSAP1Q6NVH7 229 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 MFSD7Q6UXD7 560 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 ABHD15Q6UXT9 468 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 GSTA5Q7RTV2 222 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 RTKN2Q8IZC4 609 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 KIF2BQ8N4N8 673 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 NKD2Q969F2 451 aaPredicted RBP9.21□□□□□ -0.94
CLK1-201ENST00000321356 TEPSINQ96N21 525 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 CGRRF1Q99675 332 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 PITPNM3Q9BZ71 974 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 PPCSQ9HAB8 311 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 SAYSD1Q9NPB0 183 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 RNF146Q9NTX7 359 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 SENP1Q9P0U3 644 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 SEPT9Q9UHD8 586 aaPredicted RBP9.21□□□□□ -0.94
CLK1-201ENST00000321356 USTQ9Y2C2 406 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 C15orf41Q9Y2V0 281 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 RIPK3Q9Y572 518 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 NUB1Q9Y5A7 615 aa9.21□□□□□ -0.94
CLK1-201ENST00000321356 PI4K2BG5E9Z4 385 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 ALOX15BO15296 676 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 WFS1O76024 890 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 TJP3O95049 919 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 ANP32DO95626 131 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 KRT10P13645 584 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 PECAM1P16284 738 aaPredicted RBP9.2□□□□□ -0.94
CLK1-201ENST00000321356 ACOT2P49753 483 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 POLGP54098 1239 aaPredicted RBP9.2□□□□□ -0.94
CLK1-201ENST00000321356 VCPP55072 806 aaKnown RBP9.2□□□□□ -0.94
CLK1-201ENST00000321356 ACTR2P61160 394 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 RPL7AP62424 266 aaKnown RBP9.2□□□□□ -0.94
CLK1-201ENST00000321356 NOP14P78316 857 aaKnown RBP9.2□□□□□ -0.94
CLK1-201ENST00000321356 MYO1EQ12965 1108 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 FASTKD3Q14CZ7 662 aaKnown RBP9.2□□□□□ -0.94
CLK1-201ENST00000321356 EMC2Q15006 297 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 PDK4Q16654 411 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 ATP13A4Q4VNC1 1196 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 XKR3Q5GH77 459 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 RNASEH2BQ5TBB1 312 aaKnown RBP9.2□□□□□ -0.94
CLK1-201ENST00000321356 SPOCD1Q6ZMY3 1216 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 MAB21L3Q8N8X9 362 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 REPS2Q8NFH8 660 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 PHACTR1Q9C0D0 580 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms