RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 MTHFD1LQ6UB35 978 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 C15orf39Q6ZRI6 1047 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 CPLX4Q7Z7G2 160 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 ANKRD23Q86SG2 305 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 SESTD1Q86VW0 696 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 DNAJB3Q8WWF6 145 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 LPIN3Q9BQK8 851 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 TMBIM4Q9HC24 238 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 ERVK-5Q9HDB9 667 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 AMFRQ9UKV5 643 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 DIS3Q9Y2L1 958 aaKnown RBP8.09□□□□□ -1.11
TRIM55-202ENST00000315962 PTPN22Q9Y2R2 807 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 IGKV6-21A0A0C4DH24 114 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 H0YCG3 227 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 ACKR2O00590 384 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 OGTO15294 1046 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 P4HA2O15460 535 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 TREHO43280 583 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 HCRTO43612 131 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 CAND2O75155 1236 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 FAM107AO95990 144 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 C6orf222P0C671 652 aaPredicted RBP8.09□□□□□ -1.11
TRIM55-202ENST00000315962 TMEM253P0C7T8 217 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 RDXP35241 583 aaKnown RBP8.09□□□□□ -1.11
TRIM55-202ENST00000315962 GCLCP48506 637 aaPredicted RBP8.09□□□□□ -1.11
TRIM55-202ENST00000315962 EFNA5P52803 228 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 GRB14Q14449 540 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 LRRC14Q15048 493 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 FAM110CQ1W6H9 321 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 RUFY4Q6ZNE9 571 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 ZNF572Q7Z3I7 529 aaPredicted RBP8.09□□□□□ -1.11
TRIM55-202ENST00000315962 RBBP8NLQ8NC74 664 aaPredicted RBP8.09□□□□□ -1.11
TRIM55-202ENST00000315962 ZNF564Q8TBZ8 553 aaPredicted RBP8.09□□□□□ -1.11
TRIM55-202ENST00000315962 TMEM40Q8WWA1 233 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 TCP11Q8WWU5 503 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 N4BP2L2Q92802 583 aaPredicted RBP8.09□□□□□ -1.11
TRIM55-202ENST00000315962 HVCN1Q96D96 273 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 ZSWIM1Q9BR11 485 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 HEMGNQ9BXL5 484 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 IMPG2Q9BZV3 1241 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 ABHD16BQ9H3Z7 469 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 PCDH10Q9P2E7 1040 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 ANAPC7Q9UJX3 599 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 NENFQ9UMX5 172 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 STYXL1Q9Y6J8 313 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 MYADML2A6NDP7 307 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 ABLIM1O14639 778 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 TNPO2O14787 897 aaKnown RBP8.09□□□□□ -1.12
TRIM55-202ENST00000315962 TCF4P15884 667 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 IGFBP6P24592 240 aaPredicted RBP8.09□□□□□ -1.12
TRIM55-202ENST00000315962 KCNJ1P48048 391 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 RPL7AP62424 266 aaKnown RBP8.09□□□□□ -1.12
TRIM55-202ENST00000315962 CAP1Q01518 475 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 SNX1Q13596 522 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 BYSLQ13895 437 aaKnown RBP8.09□□□□□ -1.12
TRIM55-202ENST00000315962 DGKDQ16760 1214 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 DUOXA2Q1HG44 320 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 DUSP28Q4G0W2 176 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 ATP13A4Q4VNC1 1196 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 CYP4F22Q6NT55 531 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 MPZL3Q6UWV2 235 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 TLK2Q86UE8 772 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 FAM228AQ86W67 206 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 TFAP2BQ92481 460 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 SEC16BQ96JE7 1060 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 EIF2AQ9BY44 585 aaKnown RBP8.09□□□□□ -1.12
TRIM55-202ENST00000315962 CISHQ9NSE2 258 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 GEMIN8Q9NWZ8 242 aaKnown RBP8.09□□□□□ -1.12
TRIM55-202ENST00000315962 BAIAP2L1Q9UHR4 511 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 CPSF3Q9UKF6 684 aaKnown RBP8.09□□□□□ -1.12
TRIM55-202ENST00000315962 SNX24Q9Y343 169 aa8.09□□□□□ -1.12
TRIM55-202ENST00000315962 GMNCA6NCL1 334 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 RTN2O75298 545 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 HOXC6P09630 235 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 CTSHP09668 335 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 PYGMP11217 842 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 ACO1P21399 889 aaKnown RBP8.08□□□□□ -1.12
TRIM55-202ENST00000315962 NSFP46459 744 aaKnown RBP8.08□□□□□ -1.12
TRIM55-202ENST00000315962 PLTPP55058 493 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 SNRPFP62306 86 aaKnown RBP8.08□□□□□ -1.12
TRIM55-202ENST00000315962 ZNF699Q32M78 642 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 C10orf76Q5T2E6 689 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 TAX1BP1Q86VP1 789 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 CCDC25Q86WR0 208 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 SHCBP1Q8NEM2 672 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 ZNF606Q8WXB4 792 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 THOC1Q96FV9 657 aaKnown RBP8.08□□□□□ -1.12
TRIM55-202ENST00000315962 CGRRF1Q99675 332 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 ISCUQ9H1K1 167 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 FZD8Q9H461 694 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 TMEM134Q9H6X4 195 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 SMYD3Q9H7B4 428 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 RPF1Q9H9Y2 349 aaKnown RBP8.08□□□□□ -1.12
TRIM55-202ENST00000315962 EVPLQ92817 2033 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 H0YGN5 161 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 GOLGA8SH3BPF8 625 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 PPEF2O14830 753 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 UPP2O95045 317 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 FSBPO95073 299 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 LDHAP00338 332 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms