RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 KDM6AO15550 1401 aaPredicted RBP13.78□□□□□ -0.2
SNED1-201ENST00000310397 IGSF9BQ9UPX0 1349 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 OLFML2BQ68BL8 750 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 CYGBQ8WWM9 190 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 APBB2Q92870 758 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 ATXN7L3BQ96GX2 97 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 AIPL1Q9NZN9 384 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 ADGRB2O60241 1585 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 MYH9P35579 1960 aaKnown RBP13.77□□□□□ -0.2
SNED1-201ENST00000310397 MTSS1O43312 755 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 CCDC159P0C7I6 412 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 GZMAP12544 262 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 TRMT5Q32P41 509 aaKnown RBP13.77□□□□□ -0.2
SNED1-201ENST00000310397 PLD3Q8IV08 490 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 GOLPH3Q9H4A6 298 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 DDX28Q9NUL7 540 aaKnown RBP13.77□□□□□ -0.2
SNED1-201ENST00000310397 RSPH10B2B2RC85 870 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 RSPH10BP0C881 870 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 RALAP11233 206 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 DEFA1P59665 94 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 DEFA3P59666 94 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 TFDP3Q5H9I0 405 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 ACAD10Q6JQN1 1059 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 UNC45AQ9H3U1 944 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 MAD2L2Q9UI95 211 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 TFR2Q9UP52 801 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 CHMP2BQ9UQN3 213 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 ADGRA3Q8IWK6 1321 aa13.77□□□□□ -0.2
SNED1-201ENST00000310397 HERVK_113P62684 666 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 CENPPQ6IPU0 288 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 C20orf96Q9NUD7 363 aaPredicted RBP13.77□□□□□ -0.21
SNED1-201ENST00000310397 ANKRD26Q9UPS8 1709 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 WLSQ5T9L3 541 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 SNRNP48Q6IEG0 339 aaKnown RBP13.77□□□□□ -0.21
SNED1-201ENST00000310397 SP110Q9HB58 689 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 SRP68Q9UHB9 627 aaKnown RBP13.77□□□□□ -0.21
SNED1-201ENST00000310397 FLT1P17948 1338 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 MYO1DO94832 1006 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
SNED1-201ENST00000310397 TROAPQ12815 778 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 NME3Q13232 169 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 SLC44A4Q53GD3 710 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 MED15Q96RN5 788 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 C17orf75Q9HAS0 396 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 RNF146Q9NTX7 359 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 KLHL11Q9NVR0 708 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 CNOT7Q9UIV1 285 aaKnown RBP13.77□□□□□ -0.21
SNED1-201ENST00000310397 SEC24DO94855 1032 aaPredicted RBP13.77□□□□□ -0.21
SNED1-201ENST00000310397 NLRP9Q7RTR0 991 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 SCUBE1Q8IWY4 988 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 ZNF560Q96MR9 790 aa13.77□□□□□ -0.21
SNED1-201ENST00000310397 DMGDHQ9UI17 866 aaKnown RBP13.77□□□□□ -0.21
SNED1-201ENST00000310397 KCNA1Q09470 495 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 KCNMA1Q12791 1236 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 NAT9Q9BTE0 207 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 PAPOLBQ9NRJ5 636 aaKnown RBP13.76□□□□□ -0.21
SNED1-201ENST00000310397 HEY2Q9UBP5 337 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 UBTFL6P0CB48 400 aaPredicted RBP13.76□□□□□ -0.21
SNED1-201ENST00000310397 RBP3P10745 1247 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 PDGFRAP16234 1089 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 IREB2P48200 963 aaKnown RBP13.76□□□□□ -0.21
SNED1-201ENST00000310397 TPI1P60174 286 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 CHI3L2Q15782 390 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 AXIN2Q9Y2T1 843 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 TAF6LQ9Y6J9 622 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 AP5Z1O43299 807 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 DEPDC5O75140 1603 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 FKBP6O75344 327 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 AKR1B1P15121 316 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 STX5Q13190 355 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 PREX1Q8TCU6 1659 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 PTENP60484 403 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 TTLL4Q14679 1199 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 Q3C1V9 767 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 WDR72Q3MJ13 1102 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 SPDYCQ5MJ68 293 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 RBBP8NLQ8NC74 664 aaPredicted RBP13.76□□□□□ -0.21
SNED1-201ENST00000310397 CLMNQ96JQ2 1002 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 AGXT2Q9BYV1 514 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 LACRTQ9GZZ8 138 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 HACD3Q9P035 362 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 HAO1Q9UJM8 370 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 ARID3BQ8IVW6 561 aaPredicted RBP13.76□□□□□ -0.21
SNED1-201ENST00000310397 CALML6Q8TD86 181 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 EPB41L4AQ9HCS5 686 aaPredicted RBP13.76□□□□□ -0.21
SNED1-201ENST00000310397 ATP9BO43861 1147 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 ATP6V1G2O95670 118 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 RBBP7Q16576 425 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 KBTBD12Q3ZCT8 623 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 EAPPQ56P03 285 aaPredicted RBP13.76□□□□□ -0.21
SNED1-201ENST00000310397 MEI1Q5TIA1 1274 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 EPS8L3Q8TE67 593 aaKnown RBP13.76□□□□□ -0.21
SNED1-201ENST00000310397 PTPRN2Q92932 1015 aa13.76□□□□□ -0.21
SNED1-201ENST00000310397 TRIM45Q9H8W5 580 aaPredicted RBP13.76□□□□□ -0.21
SNED1-201ENST00000310397 RAVER2Q9HCJ3 691 aaKnown RBP13.76□□□□□ -0.21
SNED1-201ENST00000310397 TNPO2O14787 897 aaKnown RBP13.75□□□□□ -0.21
SNED1-201ENST00000310397 SERPINB1P30740 379 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 XKR3Q5GH77 459 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 GALNT4Q8N4A0 578 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 PARD3BQ8TEW8 1205 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms