RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 DNAJB1P25685 340 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 LHX1P48742 406 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 NCAPHQ15003 741 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 WDR72Q3MJ13 1102 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 ELMSAN1Q6PJG2 1045 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 CEP57Q86XR8 500 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 TAS1R2Q8TE23 839 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 RIN2Q8WYP3 895 aaPredicted RBP19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 FAM81BQ96LP2 452 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 MMRN2Q9H8L6 949 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 RXFP1Q9HBX9 757 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 SAMSN1Q9NSI8 373 aaKnown RBP19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 SNX9Q9Y5X1 595 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 MTCH2Q9Y6C9 303 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 KIAA1671Q9BY89 1806 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 CDH23Q9H251 3354 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 C2orf71A6NGG8 1288 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 OR6C75A6NL08 312 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 RFXAPO00287 272 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 SPTLC1O15269 473 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 LILRB3O75022 631 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 CLSTN1O94985 981 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 VNN1O95497 513 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 FOSL2P15408 326 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 ZNF18P17022 549 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 TRIM21P19474 475 aaKnown RBP19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 IGFBP4P22692 258 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 TKTP29401 623 aaKnown RBP19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 NDUFV1P49821 464 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 ERVFC1P60507 584 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 MYL6P60660 151 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 NOP14P78316 857 aaKnown RBP19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 PSMD5Q16401 504 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 CBWD6Q4V339 395 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 VWA3BQ502W6 1294 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 CBWD3Q5JTY5 395 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 CBWD5Q5RIA9 395 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 VARS2Q5ST30 1063 aaKnown RBP19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 PLPP4Q5VZY2 271 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 Q7L0L9 218 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 DHX40Q8IX18 779 aaKnown RBP19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 THEM5Q8N1Q8 247 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 GUCD1Q96NT3 240 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 MTRRQ9UBK8 725 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 MAFFQ9ULX9 164 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 TRIP11Q15643 1979 aa19.21■□□□□ 0.67
SSSCA1-201ENST00000309328 LRRC10BA6NIK2 292 aa19.2■□□□□ 0.66
SSSCA1-201ENST00000309328 TACC1O75410 805 aa19.2■□□□□ 0.66
SSSCA1-201ENST00000309328 SRGAP2BP0DMP2 458 aa19.2■□□□□ 0.66
SSSCA1-201ENST00000309328 MRPL58Q14197 206 aaKnown RBP19.2■□□□□ 0.66
SSSCA1-201ENST00000309328 IQCB1Q15051 598 aa19.2■□□□□ 0.66
SSSCA1-201ENST00000309328 RTP2Q5QGT7 225 aa19.2■□□□□ 0.66
SSSCA1-201ENST00000309328 OVOS1Q6IE37 1185 aa19.2■□□□□ 0.66
SSSCA1-201ENST00000309328 LIMS2Q7Z4I7 341 aa19.2■□□□□ 0.66
SSSCA1-201ENST00000309328 LNX1Q8TBB1 728 aaPredicted RBP19.2■□□□□ 0.66
SSSCA1-201ENST00000309328 MMS19Q96T76 1030 aa19.2■□□□□ 0.66
SSSCA1-201ENST00000309328 NDST4Q9H3R1 872 aa19.2■□□□□ 0.66
SSSCA1-201ENST00000309328 CYP3A43Q9HB55 503 aa19.2■□□□□ 0.66
SSSCA1-201ENST00000309328 CBX8Q9HC52 389 aa19.2■□□□□ 0.66
SSSCA1-201ENST00000309328 LIMA1Q9UHB6 759 aaKnown RBP19.2■□□□□ 0.66
SSSCA1-201ENST00000309328 SZT2Q5T011 3432 aa19.2■□□□□ 0.66
SSSCA1-201ENST00000309328 I3L4J1 428 aa19.19■□□□□ 0.66
SSSCA1-201ENST00000309328 TBXAS1P24557 533 aaPredicted RBP19.19■□□□□ 0.66
SSSCA1-201ENST00000309328 PCSK1P29120 753 aa19.19■□□□□ 0.66
SSSCA1-201ENST00000309328 CA8P35219 290 aa19.19■□□□□ 0.66
SSSCA1-201ENST00000309328 YWHAEP62258 255 aaKnown RBP19.19■□□□□ 0.66
SSSCA1-201ENST00000309328 SMARCB1Q12824 385 aa19.19■□□□□ 0.66
SSSCA1-201ENST00000309328 ADGRE1Q14246 886 aa19.19■□□□□ 0.66
SSSCA1-201ENST00000309328 GBP6Q6ZN66 633 aa19.19■□□□□ 0.66
SSSCA1-201ENST00000309328 RTL10Q7L3V2 364 aa19.19■□□□□ 0.66
SSSCA1-201ENST00000309328 TAS1R1Q7RTX1 841 aa19.19■□□□□ 0.66
SSSCA1-201ENST00000309328 ADGRF2Q8IZF7 708 aa19.19■□□□□ 0.66
SSSCA1-201ENST00000309328 NIF3L1Q9GZT8 377 aa19.19■□□□□ 0.66
SSSCA1-201ENST00000309328 TLE6Q9H808 572 aa19.19■□□□□ 0.66
SSSCA1-201ENST00000309328 C2CD2LO14523 706 aa19.18■□□□□ 0.66
SSSCA1-201ENST00000309328 IRS1P35568 1242 aa19.18■□□□□ 0.66
SSSCA1-201ENST00000309328 KRT31Q15323 416 aa19.18■□□□□ 0.66
SSSCA1-201ENST00000309328 EXOC3L4Q17RC7 722 aa19.18■□□□□ 0.66
SSSCA1-201ENST00000309328 CTXN3Q4LDR2 81 aa19.18■□□□□ 0.66
SSSCA1-201ENST00000309328 FKBP15Q5T1M5 1219 aa19.18■□□□□ 0.66
SSSCA1-201ENST00000309328 SLC8B1Q6J4K2 584 aa19.18■□□□□ 0.66
SSSCA1-201ENST00000309328 PDCL2Q8N4E4 241 aa19.18■□□□□ 0.66
SSSCA1-201ENST00000309328 MYLIPQ8WY64 445 aa19.18■□□□□ 0.66
SSSCA1-201ENST00000309328 FAM84AQ96KN4 292 aa19.18■□□□□ 0.66
SSSCA1-201ENST00000309328 NXF1Q9UBU9 619 aaKnown RBP19.18■□□□□ 0.66
SSSCA1-201ENST00000309328 L1RE1Q9UN81 338 aa19.18■□□□□ 0.66
SSSCA1-201ENST00000309328 HIDE1A8MVS5 230 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 PES1O00541 588 aaKnown RBP19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 TBC1D4O60343 1298 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 CNPP09543 421 aaKnown RBP19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 WARSP23381 471 aaKnown RBP19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 IGFBP6P24592 240 aaPredicted RBP19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 TSPY1Q01534 308 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 DUSP6Q16828 381 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 SOWAHAQ2M3V2 549 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 FILIP1LQ4L180 1135 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 HSP90AA4PQ58FG1 418 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 WSCD1Q658N2 575 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 TPGS2Q68CL5 300 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 ENOSF1Q7L5Y1 443 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms