RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 GPR17Q13304 367 aa21.44■■□□□ 1.02
PDZRN3-202ENST00000308537 CUL4BQ13620 913 aa21.44■■□□□ 1.02
PDZRN3-202ENST00000308537 FAM26FQ5R3K3 315 aa21.44■■□□□ 1.02
PDZRN3-202ENST00000308537 OVOS1Q6IE37 1185 aa21.44■■□□□ 1.02
PDZRN3-202ENST00000308537 C1orf127Q8N9H9 656 aa21.44■■□□□ 1.02
PDZRN3-202ENST00000308537 SCFD1Q8WVM8 642 aa21.44■■□□□ 1.02
PDZRN3-202ENST00000308537 LRRC3Q9BY71 257 aa21.44■■□□□ 1.02
PDZRN3-202ENST00000308537 OXCT2Q9BYC2 517 aaPredicted RBP21.44■■□□□ 1.02
PDZRN3-202ENST00000308537 DNAJC25Q9H1X3 360 aa21.44■■□□□ 1.02
PDZRN3-202ENST00000308537 PCIF1Q9H4Z3 704 aa21.44■■□□□ 1.02
PDZRN3-202ENST00000308537 KRBA1A5PL33 1030 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 OR6C75A6NL08 312 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 PRRG1O14668 218 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 KLRC4O43908 158 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 LDHAP00338 332 aaKnown RBP21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 CPB1P15086 417 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 EPHA5P54756 1037 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 AMPD3Q01432 767 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 NHLH1Q02575 133 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 MYBPC2Q14324 1141 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 GRAMD1CQ8IYS0 662 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 SYCP3Q8IZU3 236 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 TCEAL4Q96EI5 215 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 PDE11AQ9HCR9 933 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 RBAKQ9NYW8 714 aaPredicted RBP21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 SIX4Q9UIU6 781 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 HPSEQ9Y251 543 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 YIPF1Q9Y548 306 aa21.43■■□□□ 1.02
PDZRN3-202ENST00000308537 FAM237AA0A1B0GTK4 181 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 MTMR11A4FU01 709 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 LRG1P02750 347 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 SRFP11831 508 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 ODC1P11926 461 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 CEBPBP17676 345 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 PTPN2P17706 415 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 ELF1P32519 619 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 TAF6P49848 677 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 BMT2Q1RMZ1 405 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 CENPPQ6IPU0 288 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 CBWD2Q8IUF1 395 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 GPD1LQ8N335 351 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 TTC9BQ8N6N2 239 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 ING5Q8WYH8 240 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 PGLYRP2Q96PD5 576 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 GZF1Q9H116 711 aaPredicted RBP21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 SLC2A4RGQ9NR83 387 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 WNT16Q9UBV4 365 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 SERTAD1Q9UHV2 236 aa21.42■■□□□ 1.02
PDZRN3-202ENST00000308537 HOXD11P31277 338 aaPredicted RBP21.41■■□□□ 1.02
PDZRN3-202ENST00000308537 TWF1Q12792 350 aa21.41■■□□□ 1.02
PDZRN3-202ENST00000308537 ARMCX5Q6P1M9 558 aa21.41■■□□□ 1.02
PDZRN3-202ENST00000308537 USP37Q86T82 979 aa21.41■■□□□ 1.02
PDZRN3-202ENST00000308537 HS6ST3Q8IZP7 471 aa21.41■■□□□ 1.02
PDZRN3-202ENST00000308537 ATAD1Q8NBU5 361 aa21.41■■□□□ 1.02
PDZRN3-202ENST00000308537 GPR152Q8TDT2 470 aa21.41■■□□□ 1.02
PDZRN3-202ENST00000308537 FAM13BQ9NYF5 915 aa21.41■■□□□ 1.02
PDZRN3-202ENST00000308537 HSPBP1Q9NZL4 362 aa21.41■■□□□ 1.02
PDZRN3-202ENST00000308537 MRPS23Q9Y3D9 190 aaKnown RBP21.41■■□□□ 1.02
PDZRN3-202ENST00000308537 F5P12259 2224 aa21.41■■□□□ 1.02
PDZRN3-202ENST00000308537 USP34Q70CQ2 3546 aa21.41■■□□□ 1.02
PDZRN3-202ENST00000308537 COL4A2P08572 1712 aa21.41■■□□□ 1.02
PDZRN3-202ENST00000308537 UBE4BO95155 1302 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 PVALEFA0A1B0GWK0 134 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 CYB561D2O14569 222 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 ITGB3P05106 788 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 CFHP08603 1231 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 SLFN14P0C7P3 912 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 PFKFB1P16118 471 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 CMA1P23946 247 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 FCARP24071 287 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 POLR2BP30876 1174 aaKnown RBP21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 AFMP43652 599 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 TFAMQ00059 246 aaKnown RBP21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 DUSP4Q13115 394 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 WSCD1Q658N2 575 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 LRRTM3Q86VH5 581 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 TMC8Q8IU68 726 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 OR5B17Q8NGF7 314 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 CORO1BQ9BR76 489 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 PYM1Q9BRP8 204 aaKnown RBP21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 ZCWPW1Q9H0M4 648 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 AGPAT3Q9NRZ7 376 aa21.4■■□□□ 1.02
PDZRN3-202ENST00000308537 A0A1B0GVL5 298 aa21.39■■□□□ 1.01
PDZRN3-202ENST00000308537 KPNA7A9QM74 516 aa21.39■■□□□ 1.01
PDZRN3-202ENST00000308537 KIAA0391O15091 583 aaKnown RBP21.39■■□□□ 1.01
PDZRN3-202ENST00000308537 PI15O43692 258 aa21.39■■□□□ 1.01
PDZRN3-202ENST00000308537 MICAL2O94851 1124 aa21.39■■□□□ 1.01
PDZRN3-202ENST00000308537 CLCN5P51795 746 aa21.39■■□□□ 1.01
PDZRN3-202ENST00000308537 LMBRD2Q68DH5 695 aaPredicted RBP21.39■■□□□ 1.01
PDZRN3-202ENST00000308537 ASTLQ6HA08 431 aaPredicted RBP21.39■■□□□ 1.01
PDZRN3-202ENST00000308537 SIX5Q8N196 739 aa21.39■■□□□ 1.01
PDZRN3-202ENST00000308537 PAGE5Q96GU1 130 aa21.39■■□□□ 1.01
PDZRN3-202ENST00000308537 PLA2G2FQ9BZM2 168 aa21.39■■□□□ 1.01
PDZRN3-202ENST00000308537 MTMR12Q9C0I1 747 aa21.39■■□□□ 1.01
PDZRN3-202ENST00000308537 INTS13Q9NVM9 706 aa21.39■■□□□ 1.01
PDZRN3-202ENST00000308537 GDE1Q9NZC3 331 aa21.39■■□□□ 1.01
PDZRN3-202ENST00000308537 NCANO14594 1321 aa21.38■■□□□ 1.01
PDZRN3-202ENST00000308537 DENND4CQ5VZ89 1909 aa21.38■■□□□ 1.01
PDZRN3-202ENST00000308537 AOC1P19801 751 aa21.38■■□□□ 1.01
PDZRN3-202ENST00000308537 GPC5P78333 572 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 241.3 ms