RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 GTSE1Q9NYZ3 720 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 C3orf70A6NLC5 250 aaPredicted RBP11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 LBRQ14739 615 aaKnown RBP11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 SLC25A41Q8N5S1 370 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 CFAP61Q8NHU2 1237 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 PGLYRP2Q96PD5 576 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 ZBTB18Q99592 522 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 BPIFA3Q9BQP9 254 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 BFARQ9NZS9 450 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 TREML2Q5T2D2 321 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 GAS2L1Q99501 681 aaPredicted RBP11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 PACSIN2Q9UNF0 486 aaPredicted RBP11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 GPD1P21695 349 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 FLT3LGP49771 235 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 EPHB4P54760 987 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 GPATCH11Q8N954 259 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 ADAM2Q99965 735 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 CIPCQ9C0C6 399 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 TIMM13Q9Y5L4 95 aaPredicted RBP11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 PSMD3O43242 534 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 TLR2O60603 784 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 HSPA4LO95757 839 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 GNGT1P63211 74 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 MRPS25P82663 173 aaKnown RBP11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 ELAVL2Q12926 359 aaKnown RBP11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 METTL16Q86W50 562 aaKnown RBP11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 CHST12Q9NRB3 414 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 SYNDIG1LA6NDD5 238 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 BAG2O95816 211 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 EFEMP1Q12805 493 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 ATXN3LQ9H3M9 355 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 IL17RBQ9NRM6 502 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 ANKRD26Q9UPS8 1709 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 ZNF189O75820 626 aaPredicted RBP11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 SLC2A3P11169 496 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 COPS2P61201 443 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 RABGAP1LQ5R372 815 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 C1orf54Q8WWF1 131 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 HPS5Q9UPZ3 1129 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 TAF6LQ9Y6J9 622 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 CNTNAP2Q9UHC6 1331 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 M0QYT0 321 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 ANP32DO95626 131 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 KRT14P02533 472 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 RCOR2Q8IZ40 523 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 GIPC2Q8TF65 315 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 UPF1Q92900 1129 aaKnown RBP eCLIP11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 DDX27Q96GQ7 796 aaKnown RBP11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 TLR8Q9NR97 1041 aaKnown RBP11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 PLA2G4CQ9UP65 541 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 KIF3CO14782 793 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 LZTS3O60299 673 aaPredicted RBP11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 KRT37O76014 449 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 RHOBTB3O94955 611 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 MUTP22033 750 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 SLC1A1P43005 524 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 ATXN3P54252 364 aaPredicted RBP11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 VCPP55072 806 aaKnown RBP11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 SMTNL2Q2TAL5 461 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 RPRD1AQ96P16 312 aaPredicted RBP11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 DDIT4Q9NX09 232 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 ARHGAP10A1A4S6 786 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 CCDC78A2IDD5 438 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 SP100P23497 879 aaPredicted RBP11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 ART3Q13508 389 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 ZKSCAN8Q15776 578 aaPredicted RBP11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 PREPLQ4J6C6 727 aaPredicted RBP11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 PDXDC1Q6P996 788 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 RASGRP2Q7LDG7 609 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 MORC4Q8TE76 937 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 AGPAT3Q9NRZ7 376 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 SLC30A1Q9Y6M5 507 aa11.24□□□□□ -0.61
SYNPO2-201ENST00000307142 TEX33O43247 280 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 NDUFS3O75489 264 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 E2F5Q15329 346 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 PALB2Q86YC2 1186 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 RIN2Q8WYP3 895 aaPredicted RBP11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 TMEM117Q9H0C3 514 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 A1CFQ9NQ94 594 aaKnown RBP11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 DDX43Q9NXZ2 648 aaKnown RBP11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 HMGCRP04035 888 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 ARSEP51690 589 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 STK4Q13043 487 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 CUL2Q13617 745 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 MYRIPQ8NFW9 859 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 MAML1Q92585 1016 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 ERLEC1Q96DZ1 483 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 RIOX1Q9H6W3 641 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 TTC26A0AVF1 554 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 COPEO14579 308 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 SMIM24O75264 130 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 HSPA8P11142 646 aaKnown RBP11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 PDAP1Q13442 181 aaKnown RBP11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 GRIK5Q16478 980 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 CELF3Q5SZQ8 465 aaKnown RBP11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 MOXD1Q6UVY6 613 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 STN1Q9H668 368 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms