RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 ESYT3A0FGR9 886 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 AGPSO00116 658 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 HAS3O00219 553 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 FSCN2O14926 492 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 DYNC1LI2O43237 492 aaPredicted RBP20.65■□□□□ 0.9
HOXC4-201ENST00000303406 HSF2BPO75031 334 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 CD58P19256 250 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 RGS2P41220 211 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 FNTAP49354 379 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 ZNF157P51786 506 aaPredicted RBP20.65■□□□□ 0.9
HOXC4-201ENST00000303406 DR1Q01658 176 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 TMEM132DQ14C87 1099 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 MMS22LQ6ZRQ5 1243 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 PASD1Q8IV76 773 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 PRELID2Q8N945 189 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 KAT2BQ92831 832 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 LRRC45Q96CN5 670 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 PKNOX2Q96KN3 472 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 SCLT1Q96NL6 688 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 SH3GL2Q99962 352 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 HINFPQ9BQA5 517 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 ERVK-5Q9HDB9 667 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 IP6K2Q9UHH9 426 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 NR2E1Q9Y466 385 aa20.65■□□□□ 0.9
HOXC4-201ENST00000303406 TCRBV5S1A1TA0A578 114 aa20.64■□□□□ 0.9
HOXC4-201ENST00000303406 FAM170AA1A519 330 aa20.64■□□□□ 0.9
HOXC4-201ENST00000303406 TTI1O43156 1089 aa20.64■□□□□ 0.9
HOXC4-201ENST00000303406 OPA1O60313 960 aa20.64■□□□□ 0.9
HOXC4-201ENST00000303406 SMIM10L2AP0DMW4 78 aa20.64■□□□□ 0.9
HOXC4-201ENST00000303406 SMIM10L2BP0DMW5 78 aa20.64■□□□□ 0.9
HOXC4-201ENST00000303406 CPT1AP50416 773 aa20.64■□□□□ 0.9
HOXC4-201ENST00000303406 GSCP56915 257 aaPredicted RBP20.64■□□□□ 0.9
HOXC4-201ENST00000303406 RGMBQ6NW40 437 aa20.64■□□□□ 0.9
HOXC4-201ENST00000303406 ILDR2Q71H61 639 aa20.64■□□□□ 0.9
HOXC4-201ENST00000303406 TLK2Q86UE8 772 aa20.64■□□□□ 0.9
HOXC4-201ENST00000303406 EXOC4Q96A65 974 aa20.64■□□□□ 0.9
HOXC4-201ENST00000303406 GDAP1L1Q96MZ0 367 aa20.64■□□□□ 0.9
HOXC4-201ENST00000303406 SETD4Q9NVD3 440 aa20.64■□□□□ 0.9
HOXC4-201ENST00000303406 PODXLO00592 558 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 GPR32O75388 356 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 KRT19P08727 400 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 WEE2P0C1S8 567 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 BRD2P25440 801 aaKnown RBP20.63■□□□□ 0.89
HOXC4-201ENST00000303406 AXLP30530 894 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 GGCXP38435 758 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 ADAM17P78536 824 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 RBP5P82980 135 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 DUPD1Q68J44 220 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 RHOT1Q8IXI2 618 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 GOLGA6L1Q8N7Z2 621 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 TSEN2Q8NCE0 465 aaKnown RBP20.63■□□□□ 0.89
HOXC4-201ENST00000303406 APBA2Q99767 749 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 ERP44Q9BS26 406 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 FAM129AQ9BZQ8 928 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 FLRT1Q9NZU1 646 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 STRIP2Q9ULQ0 834 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 GOLGA8KD6RF30 607 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 TLR3O15455 904 aaKnown RBP20.63■□□□□ 0.89
HOXC4-201ENST00000303406 ITGB3P05106 788 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 SLC10A3P09131 477 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 FAM153BP0C7A2 387 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 PTGIRP43119 386 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 PSEN2P49810 448 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 LACTBP83111 547 aaPredicted RBP20.63■□□□□ 0.89
HOXC4-201ENST00000303406 DMTNQ08495 405 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 HLTFQ14527 1009 aaKnown RBP eCLIP20.63■□□□□ 0.89
HOXC4-201ENST00000303406 MFSD10Q14728 455 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 SIX1Q15475 284 aaPredicted RBP20.63■□□□□ 0.89
HOXC4-201ENST00000303406 FAM153CQ494X1 144 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 SPDYCQ5MJ68 293 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 IFNL1Q8IU54 200 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 KATNAL2Q8IYT4 538 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 IQCKQ8N0W5 287 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 SLCO2A1Q92959 643 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 DDX27Q96GQ7 796 aaKnown RBP20.63■□□□□ 0.89
HOXC4-201ENST00000303406 TSPAN18Q96SJ8 248 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 KATNAL1Q9BW62 490 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 LRRC19Q9H756 370 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 FAM153AQ9UHL3 310 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 POLIQ9UNA4 740 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 FAN1Q9Y2M0 1017 aa20.63■□□□□ 0.89
HOXC4-201ENST00000303406 TMEM191CA6NGB0 347 aa20.62■□□□□ 0.89
HOXC4-201ENST00000303406 CILPO75339 1184 aa20.62■□□□□ 0.89
HOXC4-201ENST00000303406 CSDE1O75534 798 aaKnown RBP20.62■□□□□ 0.89
HOXC4-201ENST00000303406 POLR2BP30876 1174 aaKnown RBP20.62■□□□□ 0.89
HOXC4-201ENST00000303406 WDR72Q3MJ13 1102 aa20.62■□□□□ 0.89
HOXC4-201ENST00000303406 AADACL2Q6P093 401 aa20.62■□□□□ 0.89
HOXC4-201ENST00000303406 SLC27A1Q6PCB7 646 aa20.62■□□□□ 0.89
HOXC4-201ENST00000303406 SCARA5Q6ZMJ2 495 aa20.62■□□□□ 0.89
HOXC4-201ENST00000303406 CPNE8Q86YQ8 564 aa20.62■□□□□ 0.89
HOXC4-201ENST00000303406 JAMLQ86YT9 394 aa20.62■□□□□ 0.89
HOXC4-201ENST00000303406 C1orf131Q8NDD1 294 aaKnown RBP20.62■□□□□ 0.89
HOXC4-201ENST00000303406 MAGOHBQ96A72 148 aaKnown RBP20.62■□□□□ 0.89
HOXC4-201ENST00000303406 PPP1R16BQ96T49 567 aa20.62■□□□□ 0.89
HOXC4-201ENST00000303406 ZFYVE28Q9HCC9 887 aa20.62■□□□□ 0.89
HOXC4-201ENST00000303406 VPS18Q9P253 973 aa20.62■□□□□ 0.89
HOXC4-201ENST00000303406 NXF1Q9UBU9 619 aaKnown RBP20.62■□□□□ 0.89
HOXC4-201ENST00000303406 RNF40O75150 1001 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 CYP2C9P11712 490 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 DARSP14868 501 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms