RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ATP2A1O14983 1001 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 TJP3O95049 919 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 NDUFB10O96000 172 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 FOSP01100 380 aaPredicted RBP15.48■□□□□ 0.07
COL6A2-201ENST00000300527 KRT1P04264 644 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 GCAP28676 217 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 SLC45A4Q5BKX6 768 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 BBOF1Q8ND07 529 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 ACCSQ96QU6 501 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 BGNP21810 368 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 ALYREFQ86V81 257 aaKnown RBP15.48■□□□□ 0.07
COL6A2-201ENST00000300527 PYROXD1Q8WU10 500 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 FAM111AQ96PZ2 611 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 THTPAQ9BU02 230 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 MANSC1Q9H8J5 431 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 TCEAL9Q9UHQ7 104 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 CCDC160A6NGH7 325 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 PIK3CDO00329 1044 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 GYS1P13807 737 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 TCF4P15884 667 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 RFX1P22670 979 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 HAUS6Q7Z4H7 955 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 DAW1Q8N136 415 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 DENND1AQ8TEH3 1009 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 SMYD3Q9H7B4 428 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 ZNF335Q9H4Z2 1342 aaPredicted RBP15.47■□□□□ 0.07
COL6A2-201ENST00000300527 FDX1P10109 184 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 MYL2P10916 166 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 C1orf220Q5T0J3 134 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 ARHGAP22Q7Z5H3 698 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 RHPN2Q8IUC4 686 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 PALM2Q8IXS6 379 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 ZCCHC9Q8N567 271 aaKnown RBP15.47■□□□□ 0.07
COL6A2-201ENST00000300527 DDX27Q96GQ7 796 aaKnown RBP15.47■□□□□ 0.07
COL6A2-201ENST00000300527 MBOAT7Q96N66 472 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 SYNCQ9H7C4 482 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 TAS2R1Q9NYW7 299 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 PSMC3IPQ9P2W1 217 aaPredicted RBP15.47■□□□□ 0.07
COL6A2-201ENST00000300527 MROH7Q68CQ1 1323 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 IRS2Q9Y4H2 1338 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 FAM237BA0A1B0GVD1 139 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 MAGEA13PA6NCF6 341 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 ARHGAP42A6NI28 874 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 CFHP08603 1231 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 SOX10P56693 466 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 IRX4P78413 519 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 SNRNP35Q16560 246 aaKnown RBP15.47■□□□□ 0.07
COL6A2-201ENST00000300527 CDC42EP5Q6NZY7 148 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 MIER3Q7Z3K6 550 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 ASB3Q9Y575 518 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 IKBKGQ9Y6K9 419 aa15.47■□□□□ 0.07
COL6A2-201ENST00000300527 C2CD2LO14523 706 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 ZWINTO95229 277 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 CLEC16AQ2KHT3 1053 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 SPOPLQ6IQ16 392 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 SYDE1Q6ZW31 735 aaPredicted RBP15.46■□□□□ 0.07
COL6A2-201ENST00000300527 CENPUQ71F23 418 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 BICD1Q96G01 975 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 TUFT1Q9NNX1 390 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 SEL1LQ9UBV2 794 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 ZBTB12Q9Y330 459 aaPredicted RBP15.46■□□□□ 0.07
COL6A2-201ENST00000300527 TLR3O15455 904 aaKnown RBP15.46■□□□□ 0.07
COL6A2-201ENST00000300527 SGSM1Q2NKQ1 1148 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 C3orf62Q6ZUJ4 267 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 CTAGE3PQ8IX95 158 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 RHOT1Q8IXI2 618 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 MCOLN2Q8IZK6 566 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 FBXO27Q8NI29 283 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 SH3TC2Q8TF17 1288 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 SHC3Q92529 594 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 RILPQ96NA2 401 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 ZNF184Q99676 751 aaPredicted RBP15.46■□□□□ 0.07
COL6A2-201ENST00000300527 SHCBP1LQ9BZQ2 653 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 KANSL3Q9P2N6 904 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 ACTL7BQ9Y614 415 aa15.46■□□□□ 0.07
COL6A2-201ENST00000300527 MEI4A8MW99 385 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 FCHO1O14526 889 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 CIB2O75838 187 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 MT-ND3P03897 115 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 NOVP48745 357 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 MCL1Q07820 350 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 CCNG2Q16589 344 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 C1orf146Q5VVC0 180 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 KRT39Q6A163 491 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.45■□□□□ 0.06
COL6A2-201ENST00000300527 FAM136AQ96C01 138 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 TUBGCP5Q96RT8 1024 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 UBE2OQ9C0C9 1292 aaKnown RBP15.45■□□□□ 0.06
COL6A2-201ENST00000300527 IQCGQ9H095 443 aaKnown RBP15.45■□□□□ 0.06
COL6A2-201ENST00000300527 RAB20Q9NX57 234 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 LPXNO60711 386 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 SP4Q02446 784 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 FAM98CQ17RN3 349 aaKnown RBP15.45■□□□□ 0.06
COL6A2-201ENST00000300527 MOXD1Q6UVY6 613 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 CCDC124Q96CT7 223 aaKnown RBP15.45■□□□□ 0.06
COL6A2-201ENST00000300527 NMUR2Q9GZQ4 415 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 OCEL1Q9H607 264 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 COL22A1Q8NFW1 1626 aaPredicted RBP15.45■□□□□ 0.06
COL6A2-201ENST00000300527 TCEA3O75764 348 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 ATP2B4P23634 1241 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms