RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 SMG5Q9UPR3 1016 aaKnown RBP12.48□□□□□ -0.41
SYNGAP1-201ENST00000293748 SSU72P8A0A1W2PR75 194 aa12.48□□□□□ -0.41
SYNGAP1-201ENST00000293748 HDAC4P56524 1084 aa12.48□□□□□ -0.41
SYNGAP1-201ENST00000293748 ZNF564Q8TBZ8 553 aaPredicted RBP12.48□□□□□ -0.41
SYNGAP1-201ENST00000293748 RAD54LQ92698 747 aa12.48□□□□□ -0.41
SYNGAP1-201ENST00000293748 IL17RAQ96F46 866 aa12.48□□□□□ -0.41
SYNGAP1-201ENST00000293748 ZNF333Q96JL9 665 aa12.48□□□□□ -0.41
SYNGAP1-201ENST00000293748 IRX2Q9BZI1 471 aaPredicted RBP12.48□□□□□ -0.41
SYNGAP1-201ENST00000293748 CYP26B1Q9NR63 512 aa12.48□□□□□ -0.41
SYNGAP1-201ENST00000293748 PHIPQ8WWQ0 1821 aa12.48□□□□□ -0.41
SYNGAP1-201ENST00000293748 CALB1P05937 261 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 TMEM259Q4ZIN3 620 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 HP1BP3Q5SSJ5 553 aaPredicted RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 RSRC2Q7L4I2 434 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 HEMGNQ9BXL5 484 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 KIAA1586Q9HCI6 787 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 Q9Y3F1 56 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 CDK5RAP2Q96SN8 1893 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 SOWAHBA6NEL2 793 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 PPP1R12AO14974 1030 aaPredicted RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 LDHAP00338 332 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 ARHGDIAP52565 204 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 NOP14P78316 857 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 MRPS35P82673 323 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 ZNF211Q13398 564 aaPredicted RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 PRAMEF19Q5SWL8 479 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 NUDCD3Q8IVD9 361 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 ZBTB18Q99592 522 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 SCHIP1Q9P0W5 487 aaPredicted RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 PPME1Q9Y570 386 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 SYCE1LA8MT33 242 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 CDH16O75309 829 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 PGM1P36871 562 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 COPS2P61201 443 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 KRT76Q01546 638 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 SH2D3CQ8N5H7 860 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 DAGLBQ8NCG7 672 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 SKA2Q8WVK7 121 aaPredicted RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 SNX25Q9H3E2 840 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 LRRC4Q9HBW1 653 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 AMACRQ9UHK6 382 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 TRAF3IP3Q9Y228 551 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 MROH7Q68CQ1 1323 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 NID2Q14112 1375 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 MOXD2PA6NHM9 499 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 TCP11X1B4DZS4 312 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 LPXNO60711 386 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 CD58P19256 250 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 COASYQ13057 564 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 FSCN1Q16658 493 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 DUSP28Q4G0W2 176 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 CCDC92Q53HC0 331 aaPredicted RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 NYAP1Q6ZVC0 841 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 RASSF3Q86WH2 238 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 SLC26A7Q8TE54 656 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 SCG3Q8WXD2 468 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 SGSM3Q96HU1 749 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 XPO6Q96QU8 1125 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 MTG1Q9BT17 334 aaPredicted RBP12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 C11orf49Q9H6J7 331 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 FAM8A1Q9UBU6 413 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 SEL1LQ9UBV2 794 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 STRIP2Q9ULQ0 834 aa12.47□□□□□ -0.41
SYNGAP1-201ENST00000293748 FAM107AO95990 144 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 ADCYAP1R1P41586 468 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 SLC12A1Q13621 1099 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 KNOP1Q1ED39 458 aaKnown RBP12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 SYDE1Q6ZW31 735 aaPredicted RBP12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 SFR1Q86XK3 245 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 RNPC3Q96LT9 517 aaKnown RBP12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 MXRA8Q9BRK3 442 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 EHD2Q9NZN4 543 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 L3MBTL1Q9Y468 752 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 LAMA4Q16363 1823 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 SUPT20HL2P0C7V6 817 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 MED21Q13503 144 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 KIF19Q2TAC6 998 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 NAALADL2Q58DX5 795 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 VSIG10LQ86VR7 867 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 PPM1NQ8N819 430 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 C7orf31Q8N865 590 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 L2HGDHQ9H9P8 463 aa12.46□□□□□ -0.41
SYNGAP1-201ENST00000293748 PAPOLAP51003 745 aaKnown RBP12.46□□□□□ -0.42
SYNGAP1-201ENST00000293748 NEK2P51955 445 aa12.46□□□□□ -0.42
SYNGAP1-201ENST00000293748 ATP2C1P98194 919 aaPredicted RBP12.46□□□□□ -0.42
SYNGAP1-201ENST00000293748 HIC1Q14526 733 aa12.46□□□□□ -0.42
SYNGAP1-201ENST00000293748 RHOT1Q8IXI2 618 aa12.46□□□□□ -0.42
SYNGAP1-201ENST00000293748 RNF169Q8NCN4 708 aa12.46□□□□□ -0.42
SYNGAP1-201ENST00000293748 SEC16BQ96JE7 1060 aa12.46□□□□□ -0.42
SYNGAP1-201ENST00000293748 ZWILCHQ9H900 591 aa12.46□□□□□ -0.42
SYNGAP1-201ENST00000293748 NGRNQ9NPE2 291 aaKnown RBP12.46□□□□□ -0.42
SYNGAP1-201ENST00000293748 TUBE1Q9UJT0 475 aa12.46□□□□□ -0.42
SYNGAP1-201ENST00000293748 SIPA1L1O43166 1804 aa12.46□□□□□ -0.42
SYNGAP1-201ENST00000293748 DNAJC25-GNG10A0A024R161 153 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 FTLP02792 175 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 PSAPP07602 524 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 CYBAP13498 195 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 ZFXP17010 805 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms