RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 FAM149B1Q96BN6 582 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 FIZ1Q96SL8 496 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 TRIM6Q9C030 488 aaPredicted RBP16.79■□□□□ 0.28
SMAD6-201ENST00000288840 FAM49AQ9H0Q0 323 aaPredicted RBP16.79■□□□□ 0.28
SMAD6-201ENST00000288840 KIAA1586Q9HCI6 787 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 PHLPP1O60346 1717 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 PROSCO94903 275 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 LDHAP00338 332 aaKnown RBP16.79■□□□□ 0.28
SMAD6-201ENST00000288840 TROVE2P10155 538 aaKnown RBP eCLIP16.79■□□□□ 0.28
SMAD6-201ENST00000288840 PHBP35232 272 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 BACE1P56817 501 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 PPM1NQ8N819 430 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 CRYGNQ8WXF5 182 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 CLEC4DQ8WXI8 215 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 RPF1Q9H9Y2 349 aaKnown RBP16.79■□□□□ 0.28
SMAD6-201ENST00000288840 GGA3Q9NZ52 723 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 NINJ2Q9NZG7 142 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 GRHL1Q9NZI5 618 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 SLC12A6Q9UHW9 1150 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 SHANK3Q9BYB0 1731 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 TMEM62Q0P6H9 643 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 NEDD9Q14511 834 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 C3orf62Q6ZUJ4 267 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 FAM71DQ8N9W8 422 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 MRIQ9BWK5 157 aa16.79■□□□□ 0.28
SMAD6-201ENST00000288840 A1CFQ9NQ94 594 aaKnown RBP16.79■□□□□ 0.28
SMAD6-201ENST00000288840 DOCK2Q92608 1830 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 SLC8A1P32418 973 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 GPC3P51654 580 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 HIRAP54198 1017 aaPredicted RBP16.78■□□□□ 0.28
SMAD6-201ENST00000288840 HIF1AQ16665 826 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 MDH1BQ5I0G3 518 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 FUKQ8N0W3 1084 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 MAML1Q92585 1016 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 LRRC37BQ96QE4 947 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 ADPGKQ9BRR6 497 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 MTFR1LQ9H019 292 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 HOXC10Q9NYD6 342 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 PNMA3Q9UL41 463 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 TPX2Q9ULW0 747 aaKnown RBP16.78■□□□□ 0.28
SMAD6-201ENST00000288840 NUB1Q9Y5A7 615 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 RPTORQ8N122 1335 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 A0A1B0GUA9 196 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 H0YGN5 161 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 PRKCBP05771 671 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 SAT1P21673 171 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 TARSP26639 723 aaKnown RBP16.78■□□□□ 0.28
SMAD6-201ENST00000288840 SSTR1P30872 391 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 CLCN3P51790 818 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 CDH6P55285 790 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 LY6KQ17RY6 165 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 ASAP3Q8TDY4 903 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 NOCTQ9UK39 431 aaKnown RBP16.78■□□□□ 0.28
SMAD6-201ENST00000288840 NFS1Q9Y697 457 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 CFAP69A5D8W1 941 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 SLC1A1P43005 524 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 EAPPQ56P03 285 aaPredicted RBP16.78■□□□□ 0.28
SMAD6-201ENST00000288840 CEP120Q8N960 986 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 FAF2Q96CS3 445 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 C12orf65Q9H3J6 166 aaKnown RBP16.78■□□□□ 0.28
SMAD6-201ENST00000288840 MARCOQ9UEW3 520 aaPredicted RBP16.78■□□□□ 0.28
SMAD6-201ENST00000288840 CLEC11AQ9Y240 323 aa16.78■□□□□ 0.28
SMAD6-201ENST00000288840 E2F8A0AVK6 867 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 KLRG2A4D1S0 409 aaPredicted RBP16.77■□□□□ 0.28
SMAD6-201ENST00000288840 DHX15O43143 795 aaKnown RBP16.77■□□□□ 0.28
SMAD6-201ENST00000288840 DIAPH2O60879 1101 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 BAG6P46379 1132 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 DRP2Q13474 957 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 VSIG10LQ86VR7 867 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 MPHOSPH6Q99547 160 aaKnown RBP16.77■□□□□ 0.28
SMAD6-201ENST00000288840 SLCO1B3Q9NPD5 702 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 TXNDC16Q9P2K2 825 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 MYH7BA7E2Y1 1941 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 OATP04181 439 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 PECAM1P16284 738 aaPredicted RBP16.77■□□□□ 0.28
SMAD6-201ENST00000288840 KRT4P19013 534 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 TBXAS1P24557 533 aaPredicted RBP16.77■□□□□ 0.28
SMAD6-201ENST00000288840 DSG3P32926 999 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 TCF7P36402 384 aaPredicted RBP16.77■□□□□ 0.28
SMAD6-201ENST00000288840 KCTD2Q14681 263 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 CNGA2Q16280 664 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 SPRED3Q2MJR0 410 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 KCTD17Q8N5Z5 321 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 NLRP7Q8WX94 980 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 NOD2Q9HC29 1040 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 PCYOX1Q9UHG3 505 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 ARL2BPQ9Y2Y0 163 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 ADGRA3Q8IWK6 1321 aa16.77■□□□□ 0.28
SMAD6-201ENST00000288840 FAM47DPA6NHR8 397 aa16.77■□□□□ 0.27
SMAD6-201ENST00000288840 PTGIRP43119 386 aa16.77■□□□□ 0.27
SMAD6-201ENST00000288840 MMP14P50281 582 aa16.77■□□□□ 0.27
SMAD6-201ENST00000288840 KCNJ2P63252 427 aa16.77■□□□□ 0.27
SMAD6-201ENST00000288840 ZDHHC14Q8IZN3 488 aa16.77■□□□□ 0.27
SMAD6-201ENST00000288840 SPOCK2Q92563 424 aa16.77■□□□□ 0.27
SMAD6-201ENST00000288840 MRPL4Q9BYD3 311 aaKnown RBP16.77■□□□□ 0.27
SMAD6-201ENST00000288840 CISHQ9NSE2 258 aa16.77■□□□□ 0.27
SMAD6-201ENST00000288840 ZDHHC18Q9NUE0 388 aa16.77■□□□□ 0.27
SMAD6-201ENST00000288840 GPATCH2LQ9NWQ4 482 aa16.77■□□□□ 0.27
SMAD6-201ENST00000288840 CALB1P05937 261 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 PTGER2P43116 358 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms