RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ADAMTS19Q8TE59 1207 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 RIN2Q8WYP3 895 aaPredicted RBP9.93□□□□□ -0.82
HMGN1-201ENST00000288344 ZNF516Q92618 1163 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 CASP10Q92851 521 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 PPP2R3CQ969Q6 453 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 ZNF707Q96C28 371 aaPredicted RBP9.93□□□□□ -0.82
HMGN1-201ENST00000288344 FAM84AQ96KN4 292 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 RTP3Q9BQQ7 232 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 PCIF1Q9H4Z3 704 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 PDE11AQ9HCR9 933 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 HSPBP1Q9NZL4 362 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 CGNQ9P2M7 1197 aaKnown RBP9.93□□□□□ -0.82
HMGN1-201ENST00000288344 USP15Q9Y4E8 981 aaPredicted RBP9.93□□□□□ -0.82
HMGN1-201ENST00000288344 DOCK8Q8NF50 2099 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 WDFY4Q6ZS81 3184 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 C2orf16Q68DN1 1984 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 PDXKO00764 312 aa9.92□□□□□ -0.82
HMGN1-201ENST00000288344 IL18RAPO95256 599 aa9.92□□□□□ -0.82
HMGN1-201ENST00000288344 URODP06132 367 aa9.92□□□□□ -0.82
HMGN1-201ENST00000288344 PAX3P23760 479 aa9.92□□□□□ -0.82
HMGN1-201ENST00000288344 PPP2R3AQ06190 1150 aa9.92□□□□□ -0.82
HMGN1-201ENST00000288344 CENPPQ6IPU0 288 aa9.92□□□□□ -0.82
HMGN1-201ENST00000288344 GPR149Q86SP6 731 aa9.92□□□□□ -0.82
HMGN1-201ENST00000288344 ZC3H3Q8IXZ2 948 aaKnown RBP9.92□□□□□ -0.82
HMGN1-201ENST00000288344 GUF1Q8N442 669 aaKnown RBP9.92□□□□□ -0.82
HMGN1-201ENST00000288344 C12orf76Q8N812 135 aaPredicted RBP9.92□□□□□ -0.82
HMGN1-201ENST00000288344 OR5B17Q8NGF7 314 aa9.92□□□□□ -0.82
HMGN1-201ENST00000288344 EMILIN2Q9BXX0 1053 aa9.92□□□□□ -0.82
HMGN1-201ENST00000288344 INTS13Q9NVM9 706 aa9.92□□□□□ -0.82
HMGN1-201ENST00000288344 PRKAG3Q9UGI9 489 aa9.92□□□□□ -0.82
HMGN1-201ENST00000288344 PCDHA5Q9Y5H7 936 aa9.92□□□□□ -0.82
HMGN1-201ENST00000288344 DENND4AQ7Z401 1863 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 ZNF233A6NK53 670 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 C2CD2LO14523 706 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 CLIC2O15247 247 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 TRAPPC3O43617 180 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 CST3P01034 146 aaPredicted RBP9.91□□□□□ -0.82
HMGN1-201ENST00000288344 ADH1AP07327 375 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 POU2F2P09086 479 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 KLRC2P26717 231 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 CASP4P49662 377 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 NDUFV1P49821 464 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 ITIH3Q06033 890 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 PNOCQ13519 176 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 BMS1Q14692 1282 aaKnown RBP9.91□□□□□ -0.82
HMGN1-201ENST00000288344 TMEM132DQ14C87 1099 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 PSMD6Q15008 389 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 CLUL1Q15846 466 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 PSMD5Q16401 504 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 ARMCX5Q6P1M9 558 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 C15orf39Q6ZRI6 1047 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 ANKS3Q6ZW76 656 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 STXBP4Q6ZWJ1 553 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 RTL10Q7L3V2 364 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 ADHFE1Q8IWW8 467 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 NELFCDQ8IXH7 590 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 SYCP3Q8IZU3 236 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 XXYLT1Q8NBI6 393 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 PARD3BQ8TEW8 1205 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 GSDMAQ96QA5 445 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 PLEKHA4Q9H4M7 779 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 KIAA1586Q9HCI6 787 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 GDAP2Q9NXN4 497 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 DPP3Q9NY33 737 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 RBAKQ9NYW8 714 aaPredicted RBP9.91□□□□□ -0.82
HMGN1-201ENST00000288344 FBXL5Q9UKA1 691 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 FBXW11Q9UKB1 542 aa9.91□□□□□ -0.82
HMGN1-201ENST00000288344 WDR27A2RRH5 827 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 DLL1O00548 723 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 C4BPAP04003 597 aaKnown RBP9.9□□□□□ -0.82
HMGN1-201ENST00000288344 TYMPP19971 482 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 OR1D2P34982 312 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 PRCPP42785 496 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 MATR3P43243 847 aaKnown RBP eCLIP9.9□□□□□ -0.82
HMGN1-201ENST00000288344 PTPN5P54829 565 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 USP46P62068 366 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 GUCA2AQ02747 115 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 CYP24A1Q07973 514 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 SNRNP35Q16560 246 aaKnown RBP9.9□□□□□ -0.82
HMGN1-201ENST00000288344 UVSSAQ2YD98 709 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 KIAA1841Q6NSI8 718 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 LLGL2Q6P1M3 1020 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 PDXDC1Q6P996 788 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 CYP26C1Q6V0L0 522 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 THSD4Q6ZMP0 1018 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 PALB2Q86YC2 1186 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 ZNF461Q8TAF7 563 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 ERCC4Q92889 916 aaPredicted RBP9.9□□□□□ -0.82
HMGN1-201ENST00000288344 ZFRQ96KR1 1074 aaKnown RBP9.9□□□□□ -0.82
HMGN1-201ENST00000288344 SENP8Q96LD8 212 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 MED15Q96RN5 788 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 UHRF1Q96T88 793 aaPredicted RBP9.9□□□□□ -0.82
HMGN1-201ENST00000288344 POP1Q99575 1024 aaKnown RBP9.9□□□□□ -0.82
HMGN1-201ENST00000288344 PKMYT1Q99640 499 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 XYLT2Q9H1B5 865 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 DZANK1Q9NVP4 752 aa9.9□□□□□ -0.82
HMGN1-201ENST00000288344 TSC2P49815 1807 aa9.9□□□□□ -0.83
HMGN1-201ENST00000288344 ARHGEF37A1IGU5 675 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 GABRDO14764 452 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 MAPK13O15264 365 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms