RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 SIGLEC16A6NMB1 481 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 MAGEB2O15479 319 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 SLC26A4O43511 780 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 AOC2O75106 756 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 AKAP3O75969 853 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 TOMM70O94826 608 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 CYP3A4P08684 503 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 PTPN4P29074 926 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 CIITAP33076 1130 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 COILP38432 576 aaPredicted RBP11.13□□□□□ -0.63
ERCC3-201ENST00000285398 CASP5P51878 434 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 SPIRE1Q08AE8 756 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 PABPC4Q13310 644 aaKnown RBP eCLIP11.13□□□□□ -0.638e-8■■■■■ 36.2
ERCC3-201ENST00000285398 KPNB1Q14974 876 aaKnown RBP11.13□□□□□ -0.63
ERCC3-201ENST00000285398 CYP1B1Q16678 543 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 KNOP1Q1ED39 458 aaKnown RBP11.13□□□□□ -0.63
ERCC3-201ENST00000285398 TKFCQ3LXA3 575 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 TCERG1LQ5VWI1 586 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 ZNF449Q6P9G9 518 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 GJB7Q6PEY0 223 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 RINLQ6ZS11 566 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 PPFIBP2Q8ND30 876 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 PTPRN2Q92932 1015 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 SLC35C1Q96A29 364 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 SH2D3AQ9BRG2 576 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 TLE6Q9H808 572 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 WHRNQ9P202 907 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 KIAA1024Q9UPX6 916 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 PTPN22Q9Y2R2 807 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 RABGAP1Q9Y3P9 1069 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 ALG6Q9Y672 507 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 ANKRD62A6NC57 917 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 IPO5O00410 1097 aaKnown RBP11.12□□□□□ -0.63
ERCC3-201ENST00000285398 SLC16A3O15427 465 aaKnown RBP11.12□□□□□ -0.63
ERCC3-201ENST00000285398 CDH16O75309 829 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 TJP3O95049 919 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 TTC4O95801 387 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 SETSIPP0DME0 302 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 SOX5P35711 763 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 SH3BGRP55822 239 aaPredicted RBP11.12□□□□□ -0.63
ERCC3-201ENST00000285398 SESN3P58005 492 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 MTMR1Q13613 665 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 Q4G0T1 1027 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 TMEM63BQ5T3F8 832 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 POTEGQ6S5H5 508 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 ZC3H18Q86VM9 953 aaKnown RBP11.12□□□□□ -0.63
ERCC3-201ENST00000285398 SCG3Q8WXD2 468 aaKnown RBP11.12□□□□□ -0.63
ERCC3-201ENST00000285398 MBOAT7Q96N66 472 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 MXRA8Q9BRK3 442 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 ZCWPW1Q9H0M4 648 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 LARSQ9P2J5 1176 aaKnown RBP11.12□□□□□ -0.63
ERCC3-201ENST00000285398 LGALS13Q9UHV8 139 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 PHTF1Q9UMS5 762 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 SOWAHBA6NEL2 793 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 TMEM88BA6NKF7 163 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 FAM155AB1AL88 458 aaPredicted RBP11.12□□□□□ -0.63
ERCC3-201ENST00000285398 PDXKO00764 312 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 CALUO43852 315 aaPredicted RBP11.12□□□□□ -0.63
ERCC3-201ENST00000285398 MED24O75448 989 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 ECEL1O95672 775 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 T-ENOLP0DO92 83 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 IMPDH2P12268 514 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 GSTT1P30711 240 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 HOXD13P35453 343 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 HADHBP55084 474 aaKnown RBP11.12□□□□□ -0.63
ERCC3-201ENST00000285398 PSMC6P62333 389 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 GSTA3Q16772 222 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 FOXB2Q5VYV0 432 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 C11orf63Q6NUN7 778 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 C4orf50Q6ZRC1 276 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 SEPT14Q6ZU15 432 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 EPM2AIP1Q7L775 607 aaPredicted RBP11.12□□□□□ -0.63
ERCC3-201ENST00000285398 SRRM1Q8IYB3 904 aaKnown RBP11.12□□□□□ -0.63
ERCC3-201ENST00000285398 GPRC5AQ8NFJ5 357 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 NSUN6Q8TEA1 469 aaKnown RBP11.12□□□□□ -0.63
ERCC3-201ENST00000285398 ARHGEF26Q96DR7 871 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 CCDC77Q9BR77 488 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 LNPEPQ9UIQ6 1025 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 TLL2Q9Y6L7 1015 aa11.12□□□□□ -0.63
ERCC3-201ENST00000285398 FAM47DPA6NHR8 397 aa11.11□□□□□ -0.63
ERCC3-201ENST00000285398 GAS7O60861 476 aa11.11□□□□□ -0.63
ERCC3-201ENST00000285398 KRT18P05783 430 aaKnown RBP11.11□□□□□ -0.63
ERCC3-201ENST00000285398 RPL13P26373 211 aaKnown RBP11.11□□□□□ -0.63
ERCC3-201ENST00000285398 FOXN2P32314 431 aa11.11□□□□□ -0.63
ERCC3-201ENST00000285398 SLC12A3P55017 1021 aa11.11□□□□□ -0.63
ERCC3-201ENST00000285398 CDR2Q01850 454 aa11.11□□□□□ -0.63
ERCC3-201ENST00000285398 CTTNQ14247 550 aaKnown RBP11.11□□□□□ -0.63
ERCC3-201ENST00000285398 TAF1CQ15572 869 aaPredicted RBP11.11□□□□□ -0.63
ERCC3-201ENST00000285398 KHDC1Q4VXA5 237 aaKnown RBP11.11□□□□□ -0.63
ERCC3-201ENST00000285398 ARSHQ5FYA8 562 aa11.11□□□□□ -0.63
ERCC3-201ENST00000285398 PCNX4Q63HM2 1172 aa11.11□□□□□ -0.63
ERCC3-201ENST00000285398 VSIG10LQ86VR7 867 aa11.11□□□□□ -0.63
ERCC3-201ENST00000285398 PHC3Q8NDX5 983 aa11.11□□□□□ -0.63
ERCC3-201ENST00000285398 CHST13Q8NET6 341 aa11.11□□□□□ -0.63
ERCC3-201ENST00000285398 ZSWIM1Q9BR11 485 aa11.11□□□□□ -0.63
ERCC3-201ENST00000285398 CCDC28BQ9BUN5 200 aa11.11□□□□□ -0.63
ERCC3-201ENST00000285398 THAP2Q9H0W7 228 aa11.11□□□□□ -0.63
ERCC3-201ENST00000285398 ZWILCHQ9H900 591 aa11.11□□□□□ -0.63
ERCC3-201ENST00000285398 SAR1AQ9NR31 198 aa11.11□□□□□ -0.63
ERCC3-201ENST00000285398 VAV3Q9UKW4 847 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms