RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 WDR91A4D1P6 747 aa12.02□□□□□ -0.49
SCLT1-201ENST00000281142 LGR5O75473 907 aa12.02□□□□□ -0.49
SCLT1-201ENST00000281142 RNF8O76064 485 aa12.02□□□□□ -0.49
SCLT1-201ENST00000281142 BMP3P12645 472 aa12.02□□□□□ -0.49
SCLT1-201ENST00000281142 GJC1P36383 396 aa12.02□□□□□ -0.49
SCLT1-201ENST00000281142 SREBF1P36956 1147 aa12.02□□□□□ -0.49
SCLT1-201ENST00000281142 IKQ13123 557 aaPredicted RBP12.02□□□□□ -0.49
SCLT1-201ENST00000281142 PLEKHG4Q58EX7 1191 aa12.02□□□□□ -0.49
SCLT1-201ENST00000281142 DSTYKQ6XUX3 929 aa12.02□□□□□ -0.49
SCLT1-201ENST00000281142 APBB1IPQ7Z5R6 666 aaPredicted RBP12.02□□□□□ -0.49
SCLT1-201ENST00000281142 DAW1Q8N136 415 aa12.02□□□□□ -0.49
SCLT1-201ENST00000281142 AGGF1Q8N302 714 aaeCLIP12.02□□□□□ -0.49
SCLT1-201ENST00000281142 C10orf82Q8WW14 230 aa12.02□□□□□ -0.49
SCLT1-201ENST00000281142 DNAJC9Q8WXX5 260 aa12.02□□□□□ -0.49
SCLT1-201ENST00000281142 PRR11Q96HE9 360 aaPredicted RBP12.02□□□□□ -0.49
SCLT1-201ENST00000281142 ANAPC7Q9UJX3 599 aa12.02□□□□□ -0.49
SCLT1-201ENST00000281142 TMX2Q9Y320 296 aa12.02□□□□□ -0.49
SCLT1-201ENST00000281142 USH1CQ9Y6N9 552 aa12.02□□□□□ -0.49
SCLT1-201ENST00000281142 PCNTO95613 3336 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 A0A1W2PPM1 405 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 TBX3O15119 743 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 MTA2O94776 668 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 CYP1A2P05177 515 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 ERFP50548 548 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 VAMP7P51809 220 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 FKBP1BP68106 108 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 OVGP1Q12889 678 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 AP3B2Q13367 1082 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 IZUMO3Q5VZ72 239 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 MOXD1Q6UVY6 613 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 TEX9Q8N6V9 391 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 NRG4Q8WWG1 115 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 FAM20AQ96MK3 541 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 NMRK1Q9NWW6 199 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 ASB3Q9Y575 518 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 LRRD1A4D1F6 860 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 MAPK13O15264 365 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 SLC26A4O43511 780 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 ZSCAN5DPP0CG00 497 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 SP100P23497 879 aaPredicted RBP12.01□□□□□ -0.49
SCLT1-201ENST00000281142 SPP2Q13103 211 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 MTMR2Q13614 643 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 TCEAL1Q15170 157 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 SYDE2Q5VT97 1194 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 PPP1R21Q6ZMI0 780 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 OTOP1Q7RTM1 612 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 TRABD2AQ86V40 505 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 TRAIPQ9BWF2 469 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 MOV10L1Q9BXT6 1211 aaKnown RBP12.01□□□□□ -0.49
SCLT1-201ENST00000281142 KIAA1586Q9HCI6 787 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 NPHS2Q9NP85 383 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 KLHL11Q9NVR0 708 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 DCTN4Q9UJW0 460 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 G3BP2Q9UN86 482 aaKnown RBP12.01□□□□□ -0.49
SCLT1-201ENST00000281142 STARD13Q9Y3M8 1113 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 AFG3L2Q9Y4W6 797 aa12.01□□□□□ -0.49
SCLT1-201ENST00000281142 IGLV3-22A0A075B6J6 115 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 F5H6K3 240 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 K7ENM7 598 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 BANF1O75531 89 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 CYP3A4P08684 503 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 PYGBP11216 843 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 RALAP11233 206 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 SSTR3P32745 418 aaPredicted RBP12□□□□□ -0.49
SCLT1-201ENST00000281142 RANBP1P43487 201 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 NFIL3Q16649 462 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 FOXB2Q5VYV0 432 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 MTDHQ86UE4 582 aaKnown RBP12□□□□□ -0.49
SCLT1-201ENST00000281142 TRIM74Q86UV6 250 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 TRIM73Q86UV7 250 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 LMNTD2Q8IXW0 634 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 ZNF280CQ8ND82 737 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 DENND1AQ8TEH3 1009 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 SLCO2A1Q92959 643 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 OTUD5Q96G74 571 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 TMEM117Q9H0C3 514 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 TRABDQ9H4I3 376 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 UBN1Q9NPG3 1134 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 EXOC1LA0A1B0GW35 172 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 DDX39AO00148 427 aaKnown RBP12□□□□□ -0.49
SCLT1-201ENST00000281142 SMAPO00193 183 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 EDF1O60869 148 aaKnown RBP12□□□□□ -0.49
SCLT1-201ENST00000281142 TCEA3O75764 348 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 KRT36O76013 467 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 NPTXRO95502 500 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 ETS1P14921 441 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 MUM1Q2TAK8 710 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 OTOAQ7RTW8 1153 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12□□□□□ -0.492e-6■■■■■ 37.5
SCLT1-201ENST00000281142 FAM71AQ8IYT1 594 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 ENDOVQ8N8Q3 282 aaKnown RBP12□□□□□ -0.49
SCLT1-201ENST00000281142 GMCL1P1Q8NEA9 526 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 ZFAND2BQ8WV99 257 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 GRAMD1AQ96CP6 724 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 OPTNQ96CV9 577 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 RBM15Q96T37 977 aaKnown RBP eCLIP12□□□□□ -0.497e-8■■■■□ 26.4
SCLT1-201ENST00000281142 SAYSD1Q9NPB0 183 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 TOPORSQ9NS56 1045 aaPredicted RBP12□□□□□ -0.49
SCLT1-201ENST00000281142 PKD2L1Q9P0L9 805 aa12□□□□□ -0.49
SCLT1-201ENST00000281142 SORBS3O60504 671 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms