RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 NUP85Q9BW27 656 aa22.38■■□□□ 1.17
YBX3-202ENST00000279550 NOC2LQ9Y3T9 749 aaKnown RBP22.38■■□□□ 1.17
YBX3-202ENST00000279550 TRPV2Q9Y5S1 764 aa22.38■■□□□ 1.17
YBX3-202ENST00000279550 ALG6Q9Y672 507 aa22.38■■□□□ 1.17
YBX3-202ENST00000279550 B4GALT4O60513 344 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 CTSHP09668 335 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 HOXA11P31270 313 aaPredicted RBP22.37■■□□□ 1.17
YBX3-202ENST00000279550 SSTR3P32745 418 aaPredicted RBP22.37■■□□□ 1.17
YBX3-202ENST00000279550 THPOP40225 353 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 BPIFB4P59827 614 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 CCDC70Q6NSX1 233 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 C8orf74Q6P047 294 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 ZNF677Q86XU0 584 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 BTBD6Q96KE9 485 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 KRT12Q99456 494 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 SELENOOQ9BVL4 669 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 SENP6Q9GZR1 1112 aaPredicted RBP22.37■■□□□ 1.17
YBX3-202ENST00000279550 PGRMC1O00264 195 aaKnown RBP22.37■■□□□ 1.17
YBX3-202ENST00000279550 CHRNA1P02708 482 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 MCF2P10911 925 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 ZNF132P52740 706 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 NAA35Q5VZE5 725 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 ZNF564Q8TBZ8 553 aaPredicted RBP22.37■■□□□ 1.17
YBX3-202ENST00000279550 CPA5Q8WXQ8 436 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 ALG3Q92685 438 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 SEZ6LQ9BYH1 1024 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 CRISPLD2Q9H0B8 497 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 TRPV6Q9H1D0 765 aa22.37■■□□□ 1.17
YBX3-202ENST00000279550 RPF1Q9H9Y2 349 aaKnown RBP22.37■■□□□ 1.17
YBX3-202ENST00000279550 CYP1A1P04798 512 aaPredicted RBP22.36■■□□□ 1.17
YBX3-202ENST00000279550 TMEM191BP0C7N4 346 aa22.36■■□□□ 1.17
YBX3-202ENST00000279550 STAG3L1P0CL83 205 aa22.36■■□□□ 1.17
YBX3-202ENST00000279550 MCM3P25205 808 aa22.36■■□□□ 1.17
YBX3-202ENST00000279550 MARCKSL1P49006 195 aa22.36■■□□□ 1.17
YBX3-202ENST00000279550 MGAT3Q09327 533 aa22.36■■□□□ 1.17
YBX3-202ENST00000279550 MESDQ14696 234 aa22.36■■□□□ 1.17
YBX3-202ENST00000279550 CYFIP2Q96F07 1278 aa22.36■■□□□ 1.17
YBX3-202ENST00000279550 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.36■■□□□ 1.177e-8■■□□□ 12.5
YBX3-202ENST00000279550 ADPGKQ9BRR6 497 aa22.36■■□□□ 1.17
YBX3-202ENST00000279550 IMPG2Q9BZV3 1241 aa22.36■■□□□ 1.17
YBX3-202ENST00000279550 XYLT2Q9H1B5 865 aa22.36■■□□□ 1.17
YBX3-202ENST00000279550 ST7Q9NRC1 585 aa22.36■■□□□ 1.17
YBX3-202ENST00000279550 CNOT8Q9UFF9 292 aaKnown RBP22.36■■□□□ 1.17
YBX3-202ENST00000279550 LACTBL1A8MY62 500 aa22.35■■□□□ 1.17
YBX3-202ENST00000279550 NFICP08651 508 aa22.35■■□□□ 1.17
YBX3-202ENST00000279550 AXLP30530 894 aa22.35■■□□□ 1.17
YBX3-202ENST00000279550 GNA15P30679 374 aa22.35■■□□□ 1.17
YBX3-202ENST00000279550 TRIM71Q2Q1W2 868 aaKnown RBP22.35■■□□□ 1.17
YBX3-202ENST00000279550 LLGL2Q6P1M3 1020 aa22.35■■□□□ 1.17
YBX3-202ENST00000279550 NOTUMQ6P988 496 aa22.35■■□□□ 1.17
YBX3-202ENST00000279550 PASD1Q8IV76 773 aa22.35■■□□□ 1.17
YBX3-202ENST00000279550 MCOLN2Q8IZK6 566 aa22.35■■□□□ 1.17
YBX3-202ENST00000279550 KRT35Q92764 455 aa22.35■■□□□ 1.17
YBX3-202ENST00000279550 AP1M1Q9BXS5 423 aa22.35■■□□□ 1.17
YBX3-202ENST00000279550 NIF3L1Q9GZT8 377 aa22.35■■□□□ 1.17
YBX3-202ENST00000279550 PLEKHA4Q9H4M7 779 aa22.35■■□□□ 1.17
YBX3-202ENST00000279550 IL18RAPO95256 599 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 TNNC2P02585 160 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 COMTP21964 271 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 CDK7P50613 346 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 TRPC3Q13507 836 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 SGSM1Q2NKQ1 1148 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 HDXQ7Z353 690 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 PHLDB2Q86SQ0 1253 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 KLHL7Q8IXQ5 586 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 CALR3Q96L12 384 aaKnown RBP22.34■■□□□ 1.17
YBX3-202ENST00000279550 UBXN6Q9BZV1 441 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 STIM2Q9P246 746 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 SIX4Q9UIU6 781 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 ITGA4P13612 1032 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 CD58P19256 250 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 ZNF211Q13398 564 aaPredicted RBP22.34■■□□□ 1.17
YBX3-202ENST00000279550 GLE1Q53GS7 698 aaKnown RBP22.34■■□□□ 1.17
YBX3-202ENST00000279550 C2CD6Q53TS8 623 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 SLC27A1Q6PCB7 646 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 SCARA5Q6ZMJ2 495 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 FAM228AQ86W67 206 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 RUBCNQ92622 972 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 ANKRD36BP1Q96IX9 119 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 UVRAGQ9P2Y5 699 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 POLIQ9UNA4 740 aa22.34■■□□□ 1.17
YBX3-202ENST00000279550 PIN4Q9Y237 131 aaKnown RBP22.34■■□□□ 1.17
YBX3-202ENST00000279550 ZSCAN5CA6NGD5 496 aaPredicted RBP22.33■■□□□ 1.17
YBX3-202ENST00000279550 THAP12O43422 761 aa22.33■■□□□ 1.17
YBX3-202ENST00000279550 CAND2O75155 1236 aa22.33■■□□□ 1.17
YBX3-202ENST00000279550 GLI1P08151 1106 aa22.33■■□□□ 1.17
YBX3-202ENST00000279550 TNNC1P63316 161 aa22.33■■□□□ 1.17
YBX3-202ENST00000279550 NOMO3P69849 1222 aa22.33■■□□□ 1.17
YBX3-202ENST00000279550 CENPCQ03188 943 aa22.33■■□□□ 1.17
YBX3-202ENST00000279550 CASP8Q14790 479 aa22.33■■□□□ 1.17
YBX3-202ENST00000279550 ZNF699Q32M78 642 aa22.33■■□□□ 1.17
YBX3-202ENST00000279550 DCAF4L1Q3SXM0 396 aa22.33■■□□□ 1.17
YBX3-202ENST00000279550 JADE1Q6IE81 842 aa22.33■■□□□ 1.17
YBX3-202ENST00000279550 MON1BQ7L1V2 547 aa22.33■■□□□ 1.17
YBX3-202ENST00000279550 CD101Q93033 1021 aa22.33■■□□□ 1.17
YBX3-202ENST00000279550 RPS6KC1Q96S38 1066 aa22.33■■□□□ 1.17
YBX3-202ENST00000279550 TTC7AQ9ULT0 858 aaPredicted RBP22.33■■□□□ 1.17
YBX3-202ENST00000279550 RAD51CO43502 376 aa22.32■■□□□ 1.16
YBX3-202ENST00000279550 WEE2P0C1S8 567 aa22.32■■□□□ 1.16
YBX3-202ENST00000279550 ASPAP45381 313 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms