RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 ARHGAP20Q9P2F6 1191 aa26.46■■□□□ 1.83
SSBP4-201ENST00000270061 EIF3CLB5ME19 914 aaKnown RBP26.46■■□□□ 1.83
SSBP4-201ENST00000270061 PER2O15055 1255 aa26.46■■□□□ 1.83
SSBP4-201ENST00000270061 NDUFV1P49821 464 aa26.46■■□□□ 1.83
SSBP4-201ENST00000270061 APBA1Q02410 837 aa26.46■■□□□ 1.83
SSBP4-201ENST00000270061 CETN1Q12798 172 aa26.46■■□□□ 1.83
SSBP4-201ENST00000270061 BMS1Q14692 1282 aaKnown RBP26.46■■□□□ 1.83
SSBP4-201ENST00000270061 PUS10Q3MIT2 529 aaKnown RBP26.46■■□□□ 1.83
SSBP4-201ENST00000270061 EIF3CQ99613 913 aaKnown RBP26.46■■□□□ 1.83
SSBP4-201ENST00000270061 CDCA3Q99618 268 aaPredicted RBP26.46■■□□□ 1.83
SSBP4-201ENST00000270061 FAN1Q9Y2M0 1017 aa26.46■■□□□ 1.83
SSBP4-201ENST00000270061 SSU72P8A0A1W2PR75 194 aa26.45■■□□□ 1.82
SSBP4-201ENST00000270061 TBX10O75333 385 aa26.45■■□□□ 1.82
SSBP4-201ENST00000270061 LDHAP00338 332 aaKnown RBP26.45■■□□□ 1.82
SSBP4-201ENST00000270061 CYP24A1Q07973 514 aa26.45■■□□□ 1.82
SSBP4-201ENST00000270061 PPP3CAQ08209 521 aa26.45■■□□□ 1.82
SSBP4-201ENST00000270061 MAPK8IP2Q13387 824 aaPredicted RBP26.45■■□□□ 1.82
SSBP4-201ENST00000270061 SMC1AQ14683 1233 aaKnown RBP26.45■■□□□ 1.82
SSBP4-201ENST00000270061 ATF7IP2Q5U623 682 aa26.45■■□□□ 1.82
SSBP4-201ENST00000270061 DDX53Q86TM3 631 aaKnown RBP26.45■■□□□ 1.82
SSBP4-201ENST00000270061 EHBP1Q8NDI1 1231 aa26.45■■□□□ 1.82
SSBP4-201ENST00000270061 ACRBPQ8NEB7 543 aa26.45■■□□□ 1.82
SSBP4-201ENST00000270061 NECAB3Q96P71 396 aaPredicted RBP26.45■■□□□ 1.82
SSBP4-201ENST00000270061 MIOSQ9NXC5 875 aa26.45■■□□□ 1.82
SSBP4-201ENST00000270061 KLK14Q9P0G3 267 aa26.45■■□□□ 1.82
SSBP4-201ENST00000270061 PAXBP1Q9Y5B6 917 aa26.45■■□□□ 1.82
SSBP4-201ENST00000270061 HIDE1A8MVS5 230 aa26.44■■□□□ 1.82
SSBP4-201ENST00000270061 GTF2H1P32780 548 aa26.44■■□□□ 1.82
SSBP4-201ENST00000270061 ETF1P62495 437 aaKnown RBP26.44■■□□□ 1.82
SSBP4-201ENST00000270061 KRT83P78385 493 aa26.44■■□□□ 1.82
SSBP4-201ENST00000270061 DUSP6Q16828 381 aa26.44■■□□□ 1.82
SSBP4-201ENST00000270061 DCAF4L1Q3SXM0 396 aa26.44■■□□□ 1.82
SSBP4-201ENST00000270061 EEF1DP3Q658K8 133 aa26.44■■□□□ 1.82
SSBP4-201ENST00000270061 HGSNATQ68CP4 663 aa26.44■■□□□ 1.82
SSBP4-201ENST00000270061 VPS52Q8N1B4 723 aa26.44■■□□□ 1.82
SSBP4-201ENST00000270061 LMO3Q8TAP4 145 aa26.44■■□□□ 1.82
SSBP4-201ENST00000270061 BCL7CQ8WUZ0 217 aaPredicted RBP26.44■■□□□ 1.82
SSBP4-201ENST00000270061 CCDC42Q96M95 316 aa26.44■■□□□ 1.82
SSBP4-201ENST00000270061 TARS2Q9BW92 718 aaKnown RBP26.44■■□□□ 1.82
SSBP4-201ENST00000270061 ZNF233A6NK53 670 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 SERPING1P05155 500 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 ZNF662Q6ZS27 426 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 COLGALT2Q8IYK4 626 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 GSTCDQ8NEC7 633 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 RPS6KC1Q96S38 1066 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 MRPL4Q9BYD3 311 aaKnown RBP26.43■■□□□ 1.82
SSBP4-201ENST00000270061 INTS2Q9H0H0 1204 aaKnown RBP26.43■■□□□ 1.82
SSBP4-201ENST00000270061 SNTG2Q9NY99 539 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 AGO2Q9UKV8 859 aaKnown RBP26.43■■□□□ 1.82
SSBP4-201ENST00000270061 FAM50BQ9Y247 325 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 FHOD1Q9Y613 1164 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 CITO14578 2027 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 A0A0B4J269 797 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 GRXCR2A6NFK2 248 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 TNFRSF10AO00220 468 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 NRP1O14786 923 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 LCA5LO95447 670 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 CA8P35219 290 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 JAM2P57087 298 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 DSC1Q08554 894 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 CLUL1Q15846 466 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 APBB1IPQ7Z5R6 666 aaPredicted RBP26.43■■□□□ 1.82
SSBP4-201ENST00000270061 MRPL43Q8N983 215 aaKnown RBP26.43■■□□□ 1.82
SSBP4-201ENST00000270061 STK39Q9UEW8 545 aa26.43■■□□□ 1.82
SSBP4-201ENST00000270061 REXO2Q9Y3B8 237 aaKnown RBP26.43■■□□□ 1.82
SSBP4-201ENST00000270061 RFX1P22670 979 aa26.42■■□□□ 1.82
SSBP4-201ENST00000270061 OR1G1P47890 313 aa26.42■■□□□ 1.82
SSBP4-201ENST00000270061 TERF1P54274 439 aa26.42■■□□□ 1.82
SSBP4-201ENST00000270061 FAM213AQ9BRX8 229 aa26.42■■□□□ 1.82
SSBP4-201ENST00000270061 HAPLN2Q9GZV7 340 aa26.42■■□□□ 1.82
SSBP4-201ENST00000270061 ZBP1Q9H171 429 aa26.42■■□□□ 1.82
SSBP4-201ENST00000270061 TNFSF13BQ9Y275 285 aa26.42■■□□□ 1.82
SSBP4-201ENST00000270061 PRG3Q9Y2Y8 225 aaPredicted RBP26.42■■□□□ 1.82
SSBP4-201ENST00000270061 R3HCC1Q9Y3T6 440 aaKnown RBP26.42■■□□□ 1.82
SSBP4-201ENST00000270061 C2orf71A6NGG8 1288 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 GLP2RO95838 553 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 IL9P15248 144 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 CLDN10P78369 228 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 GRIK3Q13003 919 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 ASTE1Q2TB18 679 aaPredicted RBP26.41■■□□□ 1.82
SSBP4-201ENST00000270061 KIF18AQ8NI77 898 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 SPAG5Q96R06 1193 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 ACO2Q99798 780 aaKnown RBP26.41■■□□□ 1.82
SSBP4-201ENST00000270061 TMEM8AQ9HCN3 771 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 APEX2Q9UBZ4 518 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 COQ4Q9Y3A0 265 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 LRRIQ3A6PVS8 624 aaPredicted RBP26.41■■□□□ 1.82
SSBP4-201ENST00000270061 TOM1L1O75674 476 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 RECQL4O94761 1208 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 CXCL14O95715 111 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 EIF4A3P38919 411 aaKnown RBP26.41■■□□□ 1.82
SSBP4-201ENST00000270061 GCLMP48507 274 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 MXI1P50539 228 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 IQCEQ6IPM2 695 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 ZBTB45Q96K62 511 aaPredicted RBP26.41■■□□□ 1.82
SSBP4-201ENST00000270061 CLEC1BQ9P126 229 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 CD207Q9UJ71 328 aa26.41■■□□□ 1.82
SSBP4-201ENST00000270061 BZW2Q9Y6E2 419 aaKnown RBP26.41■■□□□ 1.82
SSBP4-201ENST00000270061 IPO7O95373 1038 aaKnown RBP26.4■■□□□ 1.82
SSBP4-201ENST00000270061 PLEKP08567 350 aaPredicted RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms