RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 TFDP3Q5H9I0 405 aa12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 TMEM270Q6UE05 265 aa12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 FAM160B2Q86V87 743 aa12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 PCDH9Q9HC56 1237 aa12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 MYO9BQ13459 2157 aa12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 RICTORQ6R327 1708 aa12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 BMP3P12645 472 aa12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 CNGA2Q16280 664 aa12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 C3orf62Q6ZUJ4 267 aa12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 ARID3BQ8IVW6 561 aaPredicted RBP12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 C9orf72Q96LT7 481 aa12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 LSM8O95777 96 aaKnown RBP12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 HOXB6P17509 224 aaKnown RBP12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 ATP6V1E1P36543 226 aa12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 EZH1Q92800 747 aaPredicted RBP12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 ADPGKQ9BRR6 497 aa12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 SSU72Q9NP77 194 aaKnown RBP12.23□□□□□ -0.45
DNMT3A-201ENST00000264709 A0A087WXM4 84 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 GNA15P30679 374 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 CHN2P52757 468 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 SYDE2Q5VT97 1194 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 FAM160B1Q5W0V3 765 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 ATP8B4Q8TF62 1192 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 HES6Q96HZ4 224 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 C6orf203Q9P0P8 240 aaPredicted RBP12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 GOLGA8TH3BQL2 631 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 ACADVLP49748 655 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 APOPT1Q96IL0 206 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 SEMA4AQ9H3S1 761 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 EPB41L4AQ9HCS5 686 aaPredicted RBP12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 MYO5AQ9Y4I1 1855 aaKnown RBP12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 GNPATO15228 680 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 THRAP10827 490 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 OSBPP22059 807 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 KLK7P49862 253 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 IFRD2Q12894 506 aaPredicted RBP12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 PTK6Q13882 451 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 ARL13BQ3SXY8 428 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 DNAJC17Q9NVM6 304 aaKnown RBP12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 KLHL33A6NCF5 533 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 PSMC1P62191 440 aaKnown RBP12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 TRAPPC3LQ5T215 181 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 C12orf60Q5U649 245 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 HEATR6Q6AI08 1181 aaKnown RBP12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 ORAI2Q96SN7 254 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 DCDC2Q9UHG0 476 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 BIRC5O15392 142 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 PI4KBQ9UBF8 816 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 RIMS1Q86UR5 1692 aaKnown RBP12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 KPNA4O00629 521 aaPredicted RBP12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 MTSS1O43312 755 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 AAGABQ6PD74 315 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 ARCQ7LC44 396 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 KAT2BQ92831 832 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 KAZALD1Q96I82 304 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 C11orf70Q9BRQ4 267 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 COPG2Q9UBF2 871 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 IVNS1ABPQ9Y6Y0 642 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 AP1G2O75843 785 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 KRT19P08727 400 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 DYNLT1P63172 113 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 CDR2LQ86X02 465 aaPredicted RBP12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 KIAA2013Q8IYS2 634 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 ZNF518BQ9C0D4 1074 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 NOD1Q9Y239 953 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 SCN11AQ9UI33 1791 aa12.22□□□□□ -0.45
DNMT3A-201ENST00000264709 ANGPT2O15123 496 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 HK2P52789 917 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 NSMFQ6X4W1 530 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 KYQ8NBH2 561 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 PKD2L1Q9P0L9 805 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 CCPG1Q9ULG6 757 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 CYP27B1O15528 508 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 ATICP31939 592 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 KCNJ2P63252 427 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 EFL1Q7Z2Z2 1120 aaKnown RBP12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 SLC26A11Q86WA9 606 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 MAGEB5Q9BZ81 275 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 GPAMQ9HCL2 828 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 MRC1P22897 1456 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 E9PMD0 336 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 BBOX1O75936 387 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 USP17L8P0C7I0 530 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 PDIA6Q15084 440 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 KYAT3Q6YP21 454 aaKnown RBP12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 OR9Q1Q8NGQ5 310 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 ASAP3Q8TDY4 903 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 REEP2Q9BRK0 252 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 ZNF229Q9UJW7 825 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 hCG_2014768A0A024R1R8 64 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 A0A1B0GW55 424 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 XPOTO43592 962 aaKnown RBP12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 DNAJC6O75061 913 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 DUX4L2P0CJ85 424 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 DUX4L3P0CJ86 424 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 DUX4L4P0CJ87 422 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 DUX4L5P0CJ88 424 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 DUX4L6P0CJ89 424 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 DUX4L7P0CJ90 424 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 EPHB2P29323 1055 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms