RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 PIK3CDO00329 1044 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 SLC47A2Q86VL8 602 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 TMEM62Q0P6H9 643 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 TAF11Q15544 211 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 CYP4A22Q5TCH4 519 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 C11orf63Q6NUN7 778 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 NOTUMQ6P988 496 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 RIBC1Q8N443 379 aaPredicted RBP17.58■□□□□ 0.4
PHRF1-201ENST00000264555 MTMR12Q9C0I1 747 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 MTFR1LQ9H019 292 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 ECT2Q9H8V3 914 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 METTL5Q9NRN9 209 aaKnown RBP17.58■□□□□ 0.4
PHRF1-201ENST00000264555 CES2O00748 559 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 XPAP23025 273 aaPredicted RBP17.58■□□□□ 0.4
PHRF1-201ENST00000264555 TPI1P60174 286 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 SV2CQ496J9 727 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 UBA3Q8TBC4 463 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 SIK2Q9H0K1 926 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 FAM49BQ9NUQ9 324 aa17.58■□□□□ 0.4
PHRF1-201ENST00000264555 FAM47DPA6NHR8 397 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 SPAG6O75602 509 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 SKIP12755 728 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 TYK2P29597 1187 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 NLRP11P59045 1033 aaKnown RBP17.57■□□□□ 0.4
PHRF1-201ENST00000264555 DCAF4L1Q3SXM0 396 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 ATP8B4Q8TF62 1192 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 PLEKHA5Q9HAU0 1116 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 ADARB2Q9NS39 739 aaKnown RBP17.57■□□□□ 0.4
PHRF1-201ENST00000264555 FNDC3AQ9Y2H6 1198 aaKnown RBP17.57■□□□□ 0.4
PHRF1-201ENST00000264555 MAP3K7O43318 606 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 RARBP10826 455 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 PPARGP37231 505 aaPredicted RBP17.57■□□□□ 0.4
PHRF1-201ENST00000264555 HSD17B4P51659 736 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 VCX3AQ9NNX9 186 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 SLC38A7Q9NVC3 462 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 ZC3H7BQ9UGR2 993 aaKnown RBP17.57■□□□□ 0.4
PHRF1-201ENST00000264555 GRAP2O75791 330 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 RBP3P10745 1247 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 MKRN4PQ13434 485 aaPredicted RBP17.57■□□□□ 0.4
PHRF1-201ENST00000264555 ETNK1Q9HBU6 452 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 PHF20L1A8MW92 1017 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 SMTNL2Q2TAL5 461 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 GOLGA7BQ2TAP0 167 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 METTL7BQ6UX53 244 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 WDR49Q8IV35 697 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 LRRN4CLQ8ND94 238 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 DNAJC19Q96DA6 116 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 IFT43Q96FT9 208 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 EFHD1Q9BUP0 239 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 LMO7Q8WWI1 1683 aa17.57■□□□□ 0.4
PHRF1-201ENST00000264555 NPM3O75607 178 aaKnown RBP17.56■□□□□ 0.4
PHRF1-201ENST00000264555 TGFB3P10600 412 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 KDM7AQ6ZMT4 941 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 TRIM67Q6ZTA4 783 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 C1orf186Q6ZWK4 172 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 CDR2LQ86X02 465 aaPredicted RBP17.56■□□□□ 0.4
PHRF1-201ENST00000264555 CAVIN3Q969G5 261 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 ZFATQ9P243 1243 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 PPME1Q9Y570 386 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 APOEP02649 317 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 KITP10721 976 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 CD302Q8IX05 232 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 C4orf32Q8N8J7 132 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 AP3B1O00203 1094 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 HOXD10P28358 340 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 CLEC16AQ2KHT3 1053 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 BOLA3Q53S33 107 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 MIIPQ5JXC2 388 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 TLR10Q9BXR5 811 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 FRMD8P1Q9BZ68 369 aaPredicted RBP17.56■□□□□ 0.4
PHRF1-201ENST00000264555 CCDC195A0A1B0GUA6 201 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 NPTXRO95502 500 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 CHEK2O96017 543 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 COBLL1Q53SF7 1204 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 LRRC55Q6ZSA7 311 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 RAPGEF5Q92565 580 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 PGBD4Q96DM1 585 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 DPP3Q9NY33 737 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 KIAA1257Q9ULG3 409 aa17.56■□□□□ 0.4
PHRF1-201ENST00000264555 VGLL3A8MV65 326 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 PSMD10O75832 226 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 RRM1P23921 792 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 PNPLA4P41247 253 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 ZNF200P98182 395 aaPredicted RBP17.55■□□□□ 0.4
PHRF1-201ENST00000264555 C4orf22Q6V702 233 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 ACAD11Q709F0 780 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 PPIL6Q8IXY8 311 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 CYFIP2Q96F07 1278 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 SERPINB12Q96P63 405 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 FAM107AO95990 144 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 MOCS2O96007 188 aaPredicted RBP17.55■□□□□ 0.4
PHRF1-201ENST00000264555 ANKRD20A4Q4UJ75 823 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 ANKRD20A8PQ5CZ79 823 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 ANKRD20A2Q5SQ80 823 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 ANKRD20A1Q5TYW2 823 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 MYLK4Q86YV6 388 aaPredicted RBP17.55■□□□□ 0.4
PHRF1-201ENST00000264555 KIF9Q9HAQ2 790 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 TMEM120BA0PK00 339 aa17.55■□□□□ 0.4
PHRF1-201ENST00000264555 C6orf222P0C671 652 aaPredicted RBP17.55■□□□□ 0.4
PHRF1-201ENST00000264555 SH3BGRP55822 239 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms