RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 CCDC151A5D8V7 595 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 CAMTA2O94983 1202 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 PCNAP12004 261 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 PDGFRAP16234 1089 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 GCLCP48506 637 aaPredicted RBP16.62■□□□□ 0.25
SHANK3-201ENST00000262795 RPS6P62753 249 aaKnown RBP16.62■□□□□ 0.25
SHANK3-201ENST00000262795 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.62■□□□□ 0.25
SHANK3-201ENST00000262795 HAUS4Q9H6D7 363 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 SYNMO15061 1565 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 HOXA2O43364 376 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 HSPA1AP0DMV8 641 aaKnown RBP16.61■□□□□ 0.25
SHANK3-201ENST00000262795 HSPA1BP0DMV9 641 aaKnown RBP16.61■□□□□ 0.25
SHANK3-201ENST00000262795 BRAFP15056 766 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 GUCY1A2P33402 732 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 EPHA7Q15375 998 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 ZC2HC1CQ53FD0 456 aaPredicted RBP16.61■□□□□ 0.25
SHANK3-201ENST00000262795 CDKL3Q8IVW4 592 aaPredicted RBP16.61■□□□□ 0.25
SHANK3-201ENST00000262795 MYOCQ99972 504 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 CATSPERBQ9H7T0 1116 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 PCDHGA4Q9Y5G9 962 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 C3orf70A6NLC5 250 aaPredicted RBP16.61■□□□□ 0.25
SHANK3-201ENST00000262795 AGBL3Q8NEM8 1001 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 ACSF2Q96CM8 615 aaPredicted RBP16.61■□□□□ 0.25
SHANK3-201ENST00000262795 ARHGEF38Q9NXL2 777 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 SAMD9LQ8IVG5 1584 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 SLC12A8A0AV02 714 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 MEI4A8MW99 385 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 DYRK3O43781 588 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 EFCAB14O75071 495 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 PRR29P0C7W0 189 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 ACO1P21399 889 aaKnown RBP16.61■□□□□ 0.25
SHANK3-201ENST00000262795 MDH1BQ5I0G3 518 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 CEP70Q8NHQ1 597 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 ACER1Q8TDN7 264 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 ADORA2AP29274 412 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 KHDRBS2Q5VWX1 349 aaKnown RBP16.61■□□□□ 0.25
SHANK3-201ENST00000262795 ATP6V0D2Q8N8Y2 350 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 ARL8AQ96BM9 186 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 C18orf8Q96DM3 657 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 OMDQ99983 421 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 ABCG4Q9H172 646 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 SNX24Q9Y343 169 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 TBC1D3BA6NDS4 549 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 CDC27P30260 824 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 PLIN5Q00G26 463 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 IKBKEQ14164 716 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 RFX8Q6ZV50 586 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 SOHLH2Q9NX45 425 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 TRPM5Q9NZQ8 1165 aa16.61■□□□□ 0.25
SHANK3-201ENST00000262795 PRCPP42785 496 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 TAF6P49848 677 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 SP3Q02447 781 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 ENGASEQ8NFI3 743 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 WDCPQ9H6R7 721 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 GGT7Q9UJ14 662 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 GSG1L2A8MUP6 293 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 PDIA2Q13087 525 aaKnown RBP16.6■□□□□ 0.25
SHANK3-201ENST00000262795 NT5C1AQ9BXI3 368 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 AASDHPPTQ9NRN7 309 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 KDM1AO60341 852 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 SPATA31D3P0C874 917 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 IMPDH2P12268 514 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 EEF1DP29692 281 aaKnown RBP16.6■□□□□ 0.25
SHANK3-201ENST00000262795 SPATA31D4Q6ZUB0 917 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 METTL5Q9NRN9 209 aaKnown RBP16.6■□□□□ 0.25
SHANK3-201ENST00000262795 CNTNAP2Q9UHC6 1331 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 CBX4O00257 560 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 AARSP49588 968 aaKnown RBP eCLIP16.6■□□□□ 0.25
SHANK3-201ENST00000262795 C21orf59P57076 290 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 MORF4L2Q15014 288 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 ZBED8Q8IZ13 594 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 TDRD7Q8NHU6 1098 aaKnown RBP16.6■□□□□ 0.25
SHANK3-201ENST00000262795 RIN2Q8WYP3 895 aaPredicted RBP16.6■□□□□ 0.25
SHANK3-201ENST00000262795 ZMYND12Q9H0C1 365 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 UPF3AQ9H1J1 476 aaKnown RBP16.6■□□□□ 0.25
SHANK3-201ENST00000262795 MYO1GB0I1T2 1018 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 PJA2O43164 708 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 ITGB6P18564 788 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 FOXO4P98177 505 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 BFARQ9NZS9 450 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 PPARGC1AQ9UBK2 798 aaKnown RBP16.6■□□□□ 0.25
SHANK3-201ENST00000262795 GUCA1AP43080 201 aaPredicted RBP16.6■□□□□ 0.25
SHANK3-201ENST00000262795 MMS22LQ6ZRQ5 1243 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.6■□□□□ 0.25
SHANK3-201ENST00000262795 CCDC197Q8NCU1 140 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 TUT1Q9H6E5 874 aaKnown RBP16.6■□□□□ 0.25
SHANK3-201ENST00000262795 POLLQ9UGP5 575 aa16.6■□□□□ 0.25
SHANK3-201ENST00000262795 PSMD12O00232 456 aaPredicted RBP16.59■□□□□ 0.25
SHANK3-201ENST00000262795 SCNN1BP51168 640 aa16.59■□□□□ 0.25
SHANK3-201ENST00000262795 NPEPPSP55786 919 aa16.59■□□□□ 0.25
SHANK3-201ENST00000262795 ACOX1Q15067 660 aa16.59■□□□□ 0.25
SHANK3-201ENST00000262795 C12orf60Q5U649 245 aa16.59■□□□□ 0.25
SHANK3-201ENST00000262795 PTPRN2Q92932 1015 aa16.59■□□□□ 0.25
SHANK3-201ENST00000262795 CLIP3Q96DZ5 547 aa16.59■□□□□ 0.25
SHANK3-201ENST00000262795 KPNA7A9QM74 516 aa16.59■□□□□ 0.25
SHANK3-201ENST00000262795 H2AFYO75367 372 aaKnown RBP16.59■□□□□ 0.25
SHANK3-201ENST00000262795 PMPCBO75439 489 aa16.59■□□□□ 0.25
SHANK3-201ENST00000262795 ACTR2P61160 394 aa16.59■□□□□ 0.25
SHANK3-201ENST00000262795 MED4Q9NPJ6 270 aa16.59■□□□□ 0.25
SHANK3-201ENST00000262795 MAP3K6O95382 1288 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms