RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 DEPDC7Q96QD5 511 aa8.57□□□□□ -1.04
DSG3-201ENST00000257189 DDX47Q9H0S4 455 aaKnown RBP8.57□□□□□ -1.04
DSG3-201ENST00000257189 ISCUQ9H1K1 167 aa8.57□□□□□ -1.04
DSG3-201ENST00000257189 USE1Q9NZ43 259 aa8.57□□□□□ -1.04
DSG3-201ENST00000257189 STOML2Q9UJZ1 356 aa8.57□□□□□ -1.04
DSG3-201ENST00000257189 LRRC53A6NM62 1247 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 EVPLLA8MZ36 301 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 AKAP5P24588 427 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 STAT5AP42229 794 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 ANXA11P50995 505 aaKnown RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 STAT5BP51692 787 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 RAD23AP54725 363 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 KRT17Q04695 432 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 CHRNDQ07001 517 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 ITGB3BPQ13352 177 aaPredicted RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 TRIM25Q14258 630 aaKnown RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 PRMT9Q6P2P2 845 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 LPCAT2Q7L5N7 544 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 FOXP4Q8IVH2 680 aaPredicted RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 GALNT4Q8N4A0 578 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 PI4KBQ9UBF8 816 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 LIMA1Q9UHB6 759 aaKnown RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 IPPQ9Y573 584 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 CNTNAP4Q9C0A0 1308 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 SLCO1B7G3V0H7 640 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 MSCO60682 206 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 SRGAP2O75044 1071 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 CIAO1O76071 339 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 ABL1P00519 1130 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 FGAP02671 866 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 PTPN12Q05209 780 aaKnown RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 POU5F1BQ06416 359 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 RIPPLY1Q0D2K3 151 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 SNX17Q15036 470 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 BTN2A1Q7KYR7 527 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 LCORLQ8N3X6 602 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 RBBP8NLQ8NC74 664 aaPredicted RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 APPL2Q8NEU8 664 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 ASAP3Q8TDY4 903 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 ASZ1Q8WWH4 475 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 HSPH1Q92598 858 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 TMA16Q96EY4 203 aaKnown RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 MLPHQ9BV36 600 aaPredicted RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 ZWILCHQ9H900 591 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 MCM8Q9UJA3 840 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 USP17L15C9J2P7 530 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 USP17L13C9JLJ4 530 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 USP17L12C9JPN9 530 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 USP17L11C9JVI0 530 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 USP17L21D6R901 530 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 USP17L18D6R9N7 530 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 USP17L22D6RA61 530 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 USP17L17D6RBQ6 530 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 USP17L19D6RCP7 530 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 USP17L20D6RJB6 530 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 LCA5LO95447 670 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 SNRPAP09012 282 aaKnown RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 SUPT20HL2P0C7V6 817 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 MAGEA10P43363 369 aaPredicted RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 CACNA2D1P54289 1103 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 ACTR2P61160 394 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 TNFAIP2Q03169 654 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 USP17L24Q0WX57 530 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 MAPRE1Q15691 268 aaKnown RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 SDE2Q6IQ49 451 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 LRRC31Q6UY01 552 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 PDCD6IPQ8WUM4 868 aaKnown RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 EGFL8Q99944 293 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 ZNF577Q9BSK1 485 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 UBXN6Q9BZV1 441 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 C6orf203Q9P0P8 240 aaPredicted RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 POTEFA5A3E0 1075 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 PSMD14O00487 310 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 RGS5O15539 181 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 FARP2O94887 1054 aaPredicted RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 ALOX5P09917 674 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 MYL2P10916 166 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 ATP6V1B1P15313 513 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 RAB25P57735 213 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 PDAP1Q13442 181 aaKnown RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 P3H1Q32P28 736 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 ZNF697Q5TEC3 545 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 TTC39BQ5VTQ0 682 aaPredicted RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 PCSK9Q8NBP7 692 aaKnown RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 PPHLN1Q8NEY8 458 aaKnown RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 GPRC5AQ8NFJ5 357 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 NUP85Q9BW27 656 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 FRMD8P1Q9BZ68 369 aaPredicted RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 SLC13A1Q9BZW2 595 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 RNPEPQ9H4A4 650 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 MANSC1Q9H8J5 431 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 RMI1Q9H9A7 625 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 DPP7Q9UHL4 492 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 SPATA2Q9UM82 520 aa8.56□□□□□ -1.04
DSG3-201ENST00000257189 PRDM15P57071 1507 aaPredicted RBP8.56□□□□□ -1.04
DSG3-201ENST00000257189 PHF20L1A8MW92 1017 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 TAF4O00268 1085 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 CYTH3O43739 400 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 ATP1A3P13637 1013 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 SPRP35270 261 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms