RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ATP5BP06576 529 aaKnown RBP14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 GOLGA7BQ2TAP0 167 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 PPP6R3Q5H9R7 873 aaPredicted RBP14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 PLA2G4FQ68DD2 849 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 DCLRE1AQ6PJP8 1040 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 CCDC121Q6ZUS5 278 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 CATSPER3Q86XQ3 398 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 ATRIPQ8WXE1 791 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 AIFM3Q96NN9 605 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 ASAH2Q9NR71 780 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 GRID2IPA4D2P6 1211 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 SPATA31C2B4DYI2 1134 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 KRT37O76014 449 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 NDUFV1P49821 464 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 UNC93AQ86WB7 457 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 FAM129AQ9BZQ8 928 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 UBIAD1Q9Y5Z9 338 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 FRMPD4Q14CM0 1322 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 C10orf71Q711Q0 1435 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 KRT38O76015 456 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 ANXA9O76027 345 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 GPD1P21695 349 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 EIF4A3P38919 411 aaKnown RBP14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 IL31Q6EBC2 164 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 ERAP2Q6P179 960 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 C2orf15Q8WU43 125 aaKnown RBP14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 DEPDC1BQ8WUY9 529 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 E2F7Q96AV8 911 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 ZCCHC2Q9C0B9 1178 aaKnown RBP14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 CYP4F11Q9HBI6 524 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 KANSL1LA0AUZ9 987 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 ANO9A1A5B4 782 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 KPNA7A9QM74 516 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 MAGEC1O60732 1142 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 AP1G2O75843 785 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 EIF3BP55884 814 aaKnown RBP14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 ANTXR2P58335 489 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 PRAMEP78395 509 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 BASP1P80723 227 aaKnown RBP14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 MTHFD1LQ6UB35 978 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 HHIPL1Q96JK4 782 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 CINPQ9BW66 212 aaPredicted RBP14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 NMRK2Q9NPI5 230 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 INTUQ9ULD6 942 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 HIST1H2AGP0C0S8 130 aaPredicted RBP14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 HIST1H2ADP20671 130 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 NMT1P30419 496 aaKnown RBP14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 CUL1Q13616 776 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 MTFR1Q15390 333 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 KIZQ2M2Z5 673 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 FBXO46Q6PJ61 603 aaPredicted RBP14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 TRIM48Q8IWZ4 208 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 SHDQ96IW2 340 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 HIST1H2AHQ96KK5 128 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 SERPINB11Q96P15 392 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 HIST1H2AJQ99878 128 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 H2AFJQ9BTM1 129 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 DHX35Q9H5Z1 703 aaKnown RBP14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 ZNF286BP0CG31 522 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 CLCN3P51790 818 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 BST2Q10589 180 aaKnown RBP14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 B4GALNT4Q76KP1 1039 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 RFFLQ8WZ73 363 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 CDY2AQ9Y6F7 541 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 SLC30A1Q9Y6M5 507 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 EFCAB8A8MWE9 144 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 GHRP10912 638 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 HPDP32754 393 aaPredicted RBP14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 TTC31Q49AM3 519 aaPredicted RBP14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 STOX1Q6ZVD7 989 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 RMDN1Q96DB5 314 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 PPP1R13BQ96KQ4 1090 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 C11orf70Q9BRQ4 267 aa14.12□□□□□ -0.15
PRPF38A-201ENST00000257181 ABHD14A-ACY1A0A1B0GW23 586 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 GOLGA8KD6RF30 607 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 NOL3O60936 208 aaKnown RBP14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 ASMTLO95671 621 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 ERBB2P04626 1255 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 ICAM3P32942 547 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 RGS4P49798 205 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 TIGD5Q53EQ6 642 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 ATAT1Q5SQI0 421 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 ANKRD20A3Q5VUR7 823 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 CPA6Q8N4T0 437 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 LZTR1Q8N653 840 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 TMEM117Q9H0C3 514 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 DDX4Q9NQI0 724 aaKnown RBP14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 ZNF839A8K0R7 811 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 CYP2A6P11509 494 aaPredicted RBP14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 MYL4P12829 197 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 PRCPP42785 496 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 SKP1P63208 163 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 SLC30A10Q6XR72 485 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 HELQQ8TDG4 1101 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 RUBCNQ92622 972 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 GPR20Q99678 358 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 TUBB6Q9BUF5 446 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 LTN1O94822 1766 aa14.11□□□□□ -0.15
PRPF38A-201ENST00000257181 TRADDQ15628 312 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms