RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 PLGRKTQ9HBL7 147 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 SLC12A6Q9UHW9 1150 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 P4HA2O15460 535 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 TPST1O60507 370 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 ARHGEF16Q5VV41 709 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 TSHZ1Q6ZSZ6 1077 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 C7orf31Q8N865 590 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 CCDC17Q96LX7 622 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 ZNF577Q9BSK1 485 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 PDZK1P1A8MUH7 402 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 MAFGO15525 162 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 PSTPIP1O43586 416 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 BAIAP3O94812 1187 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 ABL1P00519 1130 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 USP11P51784 963 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 FOXO4P98177 505 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 ARHGAP17Q68EM7 881 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 FAM45BPQ6NSW5 357 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 FOXR1Q6PIV2 292 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 XXYLT1Q8NBI6 393 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 ALDH8A1Q9H2A2 487 aaPredicted RBP13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 UVRAGQ9P2Y5 699 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 GGA2Q9UJY4 613 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 APPL1Q9UKG1 709 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 TMCO1Q9UM00 188 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 SFI1A8K8P3 1242 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 MYO1GB0I1T2 1018 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 TFDP1Q14186 410 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 ZNF554Q86TJ5 538 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 TMPRSS6Q8IU80 811 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 CASKIN2Q8WXE0 1202 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 ABHD8Q96I13 439 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 PPP1R36Q96LQ0 422 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 METTL5Q9NRN9 209 aaKnown RBP13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 TMEM161AQ9NX61 479 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 ZC3H7BQ9UGR2 993 aaKnown RBP13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 M0QZ92 97 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 RPS6KA5O75582 802 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 GYPCP04921 128 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 CIITAP33076 1130 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 TRIM28Q13263 835 aaKnown RBP13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 LAMC2Q13753 1193 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 ZNF618Q5T7W0 954 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 ZNF746Q6NUN9 644 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 POTEEQ6S8J3 1075 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 C19orf18Q8NEA5 215 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 VPS50Q96JG6 964 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 SH3GLB2Q9NR46 395 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 USE1Q9NZ43 259 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 C6orf203Q9P0P8 240 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 TAGLN3Q9UI15 199 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 NOD1Q9Y239 953 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 IVNS1ABPQ9Y6Y0 642 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 A0A087WXM4 84 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 MAPK11Q15759 364 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 BNC2Q6ZN30 1099 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 EZH1Q92800 747 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 TMEM79Q9BSE2 394 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 C1orf50Q9BV19 199 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 FSD1LQ9BXM9 530 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 PCMTD2Q9NV79 361 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 ATF5Q9Y2D1 282 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 MYRFQ9Y2G1 1151 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 ZNF862O60290 1169 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 WEE2P0C1S8 567 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 SLC9A1P19634 815 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 NT5C2P49902 561 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 ALDH5A1P51649 535 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 GALCP54803 685 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 OVGP1Q12889 678 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 NAB2Q15742 525 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 CHI3L2Q15782 390 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 KNOP1Q1ED39 458 aaKnown RBP13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 AGPAT5Q9NUQ2 364 aa13.75□□□□□ -0.21
PCDHGA3-201ENST00000253812 POTECB2RU33 542 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 ABLIM1O14639 778 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 FOXN1O15353 648 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 GDF11O95390 407 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 TAF2Q6P1X5 1199 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 C3orf62Q6ZUJ4 267 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 MTDHQ86UE4 582 aaKnown RBP13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 KCNB2Q92953 911 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 GJD4Q96KN9 370 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 GCLMP48507 274 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 AKR1D1P51857 326 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 FMR1Q06787 632 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 ANGPT1Q15389 498 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 UGP2Q16851 508 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 ENOSF1Q7L5Y1 443 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 NDUFAF2Q8N183 169 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 NDNQ99608 321 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 APOL4Q9BPW4 351 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 IMPAD1Q9NX62 359 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 GALNT8Q9NY28 637 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 RRN3Q9NYV6 651 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 MAD2L2Q9UI95 211 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 PHGDHO43175 533 aaKnown RBP13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 RTN2O75298 545 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms