RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 APPL2Q8NEU8 664 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 POF1BQ8WVV4 589 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 ARNTL2Q8WYA1 636 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 LRCH3Q96II8 777 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 TTPALQ9BTX7 342 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 OXCT2Q9BYC2 517 aaPredicted RBP15.14■□□□□ 0.01
VPS25-201ENST00000253794 NIF3L1Q9GZT8 377 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 INTS2Q9H0H0 1204 aaKnown RBP15.14■□□□□ 0.01
VPS25-201ENST00000253794 ALG13Q9NP73 1137 aaKnown RBP15.14■□□□□ 0.01
VPS25-201ENST00000253794 NGRNQ9NPE2 291 aaKnown RBP15.14■□□□□ 0.01
VPS25-201ENST00000253794 LMCD1Q9NZU5 365 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 GCNT4Q9P109 453 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 L1RE1Q9UN81 338 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 SSX2IPQ9Y2D8 614 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 TSC2P49815 1807 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 PLXNA4Q9HCM2 1894 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 COL4A4P53420 1690 aaPredicted RBP15.13■□□□□ 0.01
VPS25-201ENST00000253794 A0A1W2PQC6 194 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 I3L4J1 428 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 TULP1O00294 542 aaPredicted RBP15.13■□□□□ 0.01
VPS25-201ENST00000253794 CYB561D2O14569 222 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 GABRDO14764 452 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 TBC1D4O60343 1298 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 HUS1O60921 280 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 PON1P27169 355 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 TKTP29401 623 aaKnown RBP15.13■□□□□ 0.01
VPS25-201ENST00000253794 GLUD2P49448 558 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 KCNMA1Q12791 1236 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 NR1I3Q14994 352 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 SOWAHAQ2M3V2 549 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 FILIP1LQ4L180 1135 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 WDR44Q5JSH3 913 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 RTP2Q5QGT7 225 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 ZNF697Q5TEC3 545 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 DSTYKQ6XUX3 929 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 JAKMIP2Q96AA8 810 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 FAM81BQ96LP2 452 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 NAP1L5Q96NT1 182 aaPredicted RBP15.13■□□□□ 0.01
VPS25-201ENST00000253794 PI4K2AQ9BTU6 479 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 CYP3A43Q9HB55 503 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 RXFP1Q9HBX9 757 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 PLCB1Q9NQ66 1216 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 TLR9Q9NR96 1032 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 SIK3Q9Y2K2 1263 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 DAAM1Q9Y4D1 1078 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 SNX9Q9Y5X1 595 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 BACE2Q9Y5Z0 518 aa15.13■□□□□ 0.01
VPS25-201ENST00000253794 SZT2Q5T011 3432 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 VWA8A3KMH1 1905 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 C1RP00736 705 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 URODP06132 367 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 WARSP23381 471 aaKnown RBP15.12■□□□□ 0.01
VPS25-201ENST00000253794 TBXAS1P24557 533 aaPredicted RBP15.12■□□□□ 0.01
VPS25-201ENST00000253794 ERVFC1P60507 584 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 TNNC1P63316 161 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 CREMQ03060 361 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 INCA1Q0VD86 236 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 PTPN14Q15678 1187 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 UVSSAQ2YD98 709 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 VARS2Q5ST30 1063 aaKnown RBP15.12■□□□□ 0.01
VPS25-201ENST00000253794 SPOPLQ6IQ16 392 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 ANKS3Q6ZW76 656 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 PDCL2Q8N4E4 241 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 TTC39CQ8N584 583 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 UBR7Q8N806 425 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 LNX1Q8TBB1 728 aaPredicted RBP15.12■□□□□ 0.01
VPS25-201ENST00000253794 GDPD5Q8WTR4 605 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 KBTBD7Q8WVZ9 684 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 NT5C1BQ96P26 610 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 CERS4Q9HA82 394 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 SIX2Q9NPC8 291 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.12■□□□□ 0.01
VPS25-201ENST00000253794 FNIP2Q9P278 1114 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 MTRRQ9UBK8 725 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 FBXL5Q9UKA1 691 aa15.12■□□□□ 0.01
VPS25-201ENST00000253794 H7C4K7 107 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 SERPINC1P01008 464 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 SLC9A1P19634 815 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 RFX1P22670 979 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 PBX1P40424 430 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 LHX1P48742 406 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 UBXN1Q04323 297 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 CUL2Q13617 745 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 SMC1AQ14683 1233 aaKnown RBP15.11■□□□□ 0.01
VPS25-201ENST00000253794 BMS1Q14692 1282 aaKnown RBP15.11■□□□□ 0.01
VPS25-201ENST00000253794 GRIN2CQ14957 1233 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 WSCD1Q658N2 575 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 SLC8B1Q6J4K2 584 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 PHLDB3Q6NSJ2 640 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 ADGRF2Q8IZF7 708 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 MRPL43Q8N983 215 aaKnown RBP15.11■□□□□ 0.01
VPS25-201ENST00000253794 TATDN2Q93075 761 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 MRPL38Q96DV4 380 aaKnown RBP15.11■□□□□ 0.01
VPS25-201ENST00000253794 TCF25Q9BQ70 676 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 CRACR2AQ9BSW2 395 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 MRPL17Q9NRX2 175 aaKnown RBP15.11■□□□□ 0.01
VPS25-201ENST00000253794 NXF1Q9UBU9 619 aaKnown RBP15.11■□□□□ 0.01
VPS25-201ENST00000253794 APEX2Q9UBZ4 518 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 POLIQ9UNA4 740 aa15.11■□□□□ 0.01
VPS25-201ENST00000253794 PES1O00541 588 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms