RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 SH2D4BQ5SQS7 431 aa15.77■□□□□ 0.12
UBE4B-201ENST00000253251 C1orf228Q6PIY5 440 aa15.77■□□□□ 0.12
UBE4B-201ENST00000253251 SEPT8Q92599 483 aa15.77■□□□□ 0.12
UBE4B-201ENST00000253251 KLRG2A4D1S0 409 aaPredicted RBP15.77■□□□□ 0.12
UBE4B-201ENST00000253251 CABYRO75952 493 aa15.77■□□□□ 0.12
UBE4B-201ENST00000253251 MOCS2O96007 188 aaPredicted RBP15.77■□□□□ 0.12
UBE4B-201ENST00000253251 BRD2P25440 801 aaKnown RBP15.77■□□□□ 0.12
UBE4B-201ENST00000253251 ELAVL2Q12926 359 aaKnown RBP15.77■□□□□ 0.12
UBE4B-201ENST00000253251 BYSLQ13895 437 aaKnown RBP15.77■□□□□ 0.12
UBE4B-201ENST00000253251 CELF3Q5SZQ8 465 aaKnown RBP15.77■□□□□ 0.12
UBE4B-201ENST00000253251 PORCNQ9H237 461 aa15.77■□□□□ 0.12
UBE4B-201ENST00000253251 ACTR5Q9H9F9 607 aaPredicted RBP15.77■□□□□ 0.12
UBE4B-201ENST00000253251 DNAJC17Q9NVM6 304 aaKnown RBP15.77■□□□□ 0.12
UBE4B-201ENST00000253251 OR1G1P47890 313 aa15.77■□□□□ 0.11
UBE4B-201ENST00000253251 BCAT1P54687 386 aa15.77■□□□□ 0.11
UBE4B-201ENST00000253251 PPARDQ03181 441 aa15.77■□□□□ 0.11
UBE4B-201ENST00000253251 KIZQ2M2Z5 673 aa15.77■□□□□ 0.11
UBE4B-201ENST00000253251 GJB7Q6PEY0 223 aa15.77■□□□□ 0.11
UBE4B-201ENST00000253251 NUDT18Q6ZVK8 323 aa15.77■□□□□ 0.11
UBE4B-201ENST00000253251 TAS1R2Q8TE23 839 aa15.77■□□□□ 0.11
UBE4B-201ENST00000253251 ZSWIM1Q9BR11 485 aa15.77■□□□□ 0.11
UBE4B-201ENST00000253251 PIDD1Q9HB75 910 aa15.77■□□□□ 0.11
UBE4B-201ENST00000253251 FAM49BQ9NUQ9 324 aa15.77■□□□□ 0.11
UBE4B-201ENST00000253251 KANSL3Q9P2N6 904 aa15.77■□□□□ 0.11
UBE4B-201ENST00000253251 ARHGAP42A6NI28 874 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 NOL3O60936 208 aaKnown RBP15.76■□□□□ 0.11
UBE4B-201ENST00000253251 UBA1P22314 1058 aaKnown RBP15.76■□□□□ 0.11
UBE4B-201ENST00000253251 SLC27A1Q6PCB7 646 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 POTEAQ6S8J7 498 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 PLPPR4Q7Z2D5 763 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 VCPIP1Q96JH7 1222 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 SLITRK1Q96PX8 696 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 ZMYND15Q9H091 742 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 PRDM5Q9NQX1 630 aaPredicted RBP15.76■□□□□ 0.11
UBE4B-201ENST00000253251 A0A1B0GUA9 196 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 IRF6O14896 467 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 PPP2R2AP63151 447 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 EPM2AIP1Q7L775 607 aaPredicted RBP15.76■□□□□ 0.11
UBE4B-201ENST00000253251 CRLF3Q8IUI8 442 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 SLC35C1Q96A29 364 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 ATP6V1G3Q96LB4 118 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 CYTH2Q99418 400 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 INTS13Q9NVM9 706 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 TPX2Q9ULW0 747 aaKnown RBP15.76■□□□□ 0.11
UBE4B-201ENST00000253251 CARNS1A5YM72 827 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 EEF2KO00418 725 aaKnown RBP15.76■□□□□ 0.11
UBE4B-201ENST00000253251 ZNF280AP59817 542 aaPredicted RBP15.76■□□□□ 0.11
UBE4B-201ENST00000253251 MCL1Q07820 350 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 TLK2Q86UE8 772 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 SLC9A9Q8IVB4 645 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 WDR75Q8IWA0 830 aaKnown RBP15.76■□□□□ 0.11
UBE4B-201ENST00000253251 ZBED8Q8IZ13 594 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 C1orf131Q8NDD1 294 aaKnown RBP15.76■□□□□ 0.11
UBE4B-201ENST00000253251 TNFRSF25Q93038 417 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 PPP1R12CQ9BZL4 782 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.76■□□□□ 0.11
UBE4B-201ENST00000253251 FBXL5Q9UKA1 691 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 C3orf70A6NLC5 250 aaPredicted RBP15.76■□□□□ 0.11
UBE4B-201ENST00000253251 THP07101 528 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 MFSD10Q14728 455 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 CCNI2Q6ZMN8 369 aaPredicted RBP15.76■□□□□ 0.11
UBE4B-201ENST00000253251 LMCD1Q9NZU5 365 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 CAPN7Q9Y6W3 813 aa15.76■□□□□ 0.11
UBE4B-201ENST00000253251 ESYT3A0FGR9 886 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 SPATA31C2B4DYI2 1134 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 PCK1P35558 622 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 GGCXP38435 758 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 PTGER2P43116 358 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 C1QBPQ07021 282 aaKnown RBP15.75■□□□□ 0.11
UBE4B-201ENST00000253251 MMEL1Q495T6 779 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 MSCO60682 206 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 SGPL1O95470 568 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 VTNP04004 478 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 PSEN2P49810 448 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 ZKSCAN8Q15776 578 aaPredicted RBP15.75■□□□□ 0.11
UBE4B-201ENST00000253251 MTHFD1LQ6UB35 978 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 ZC3H18Q86VM9 953 aaKnown RBP15.75■□□□□ 0.11
UBE4B-201ENST00000253251 TTC8Q8TAM2 541 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 ETNPPLQ8TBG4 499 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 TRPM4Q8TD43 1214 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 TINF2Q9BSI4 451 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 L2HGDHQ9H9P8 463 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 CASZ1Q86V15 1759 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 SPDYE5A6NIY4 337 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 KCNN4O15554 427 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 DCTN3O75935 186 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 MMEP08473 750 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 STIP1P31948 543 aaKnown RBP15.75■□□□□ 0.11
UBE4B-201ENST00000253251 COPS2P61201 443 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 PDK2Q15119 407 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 THAP2Q9H0W7 228 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 TRIM10Q9UDY6 481 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 SMIM22K7EJ46 135 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 PAX3P23760 479 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 VSNL1P62760 191 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 MRPS25P82663 173 aaKnown RBP15.75■□□□□ 0.11
UBE4B-201ENST00000253251 GTF2BQ00403 316 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 SLC13A5Q86YT5 568 aaPredicted RBP15.75■□□□□ 0.11
UBE4B-201ENST00000253251 JAMLQ86YT9 394 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 LBHD1Q9BQE6 289 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms