RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 CHST12Q9NRB3 414 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 CALCOCO1Q9P1Z2 691 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 ALPK3Q96L96 1907 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 TRIP11Q15643 1979 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 TIMP1P01033 207 aa18.14■□□□□ 0.49
CDKN1A-201ENST00000244741 GRM5P41594 1212 aa18.14■□□□□ 0.49
CDKN1A-201ENST00000244741 AFF1P51825 1210 aaKnown RBP18.14■□□□□ 0.49
CDKN1A-201ENST00000244741 RNASE9P60153 205 aaKnown RBP18.14■□□□□ 0.49
CDKN1A-201ENST00000244741 PSMD6Q15008 389 aa18.14■□□□□ 0.49
CDKN1A-201ENST00000244741 TAF3Q5VWG9 929 aa18.14■□□□□ 0.49
CDKN1A-201ENST00000244741 ZFP42Q96MM3 310 aa18.14■□□□□ 0.49
CDKN1A-201ENST00000244741 GOLPH3Q9H4A6 298 aa18.14■□□□□ 0.49
CDKN1A-201ENST00000244741 SQORQ9Y6N5 450 aa18.14■□□□□ 0.49
CDKN1A-201ENST00000244741 NFICP08651 508 aa18.14■□□□□ 0.49
CDKN1A-201ENST00000244741 ACRP10323 421 aa18.14■□□□□ 0.49
CDKN1A-201ENST00000244741 TFAMQ00059 246 aaKnown RBP18.14■□□□□ 0.49
CDKN1A-201ENST00000244741 GLE1Q53GS7 698 aaKnown RBP18.14■□□□□ 0.49
CDKN1A-201ENST00000244741 EFCAB13Q8IY85 973 aa18.14■□□□□ 0.49
CDKN1A-201ENST00000244741 VWCEQ96DN2 955 aa18.14■□□□□ 0.49
CDKN1A-201ENST00000244741 DDX3XO00571 662 aaKnown RBP eCLIP18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 MAPK13O15264 365 aa18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 GFPT2O94808 682 aa18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 GLI1P08151 1106 aa18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 NOP2P46087 812 aaKnown RBP18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 FMO5P49326 533 aa18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 GUCY2FP51841 1108 aa18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 JADE1Q6IE81 842 aa18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 APBB1IPQ7Z5R6 666 aaPredicted RBP18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 LRRC57Q8N9N7 239 aa18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 MTMR12Q9C0I1 747 aa18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 TMEM117Q9H0C3 514 aa18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 CAPN2P17655 700 aa18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 RPS6KA1Q15418 735 aa18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 SEPT8Q92599 483 aa18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 ZMAT2Q96NC0 199 aaKnown RBP18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 PLEKHA4Q9H4M7 779 aa18.13■□□□□ 0.49
CDKN1A-201ENST00000244741 CITO14578 2027 aa18.12■□□□□ 0.49
CDKN1A-201ENST00000244741 TANC1Q9C0D5 1861 aa18.12■□□□□ 0.49
CDKN1A-201ENST00000244741 GOLGA6BA6NDN3 693 aa18.12■□□□□ 0.49
CDKN1A-201ENST00000244741 KIAA0355O15063 1070 aa18.12■□□□□ 0.49
CDKN1A-201ENST00000244741 ATF7P17544 494 aaPredicted RBP18.12■□□□□ 0.49
CDKN1A-201ENST00000244741 ANXA13P27216 316 aa18.12■□□□□ 0.49
CDKN1A-201ENST00000244741 TNFRSF8P28908 595 aa18.12■□□□□ 0.49
CDKN1A-201ENST00000244741 STAT1P42224 750 aa18.12■□□□□ 0.49
CDKN1A-201ENST00000244741 YARSP54577 528 aaKnown RBP18.12■□□□□ 0.49
CDKN1A-201ENST00000244741 EPHB4P54760 987 aa18.12■□□□□ 0.49
CDKN1A-201ENST00000244741 ZSCAN26Q16670 478 aa18.12■□□□□ 0.49
CDKN1A-201ENST00000244741 TNS4Q8IZW8 715 aa18.12■□□□□ 0.49
CDKN1A-201ENST00000244741 TMC2Q8TDI7 906 aa18.12■□□□□ 0.49
CDKN1A-201ENST00000244741 ZMYND8Q9ULU4 1186 aaPredicted RBP18.12■□□□□ 0.49
CDKN1A-201ENST00000244741 A0A0U1RQF3 1178 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 ITGA4P13612 1032 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 FERP16591 822 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 ACTN2P35609 894 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 MLH1P40692 756 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 MYL7Q01449 175 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 BIRC3Q13489 604 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 PTPROQ16827 1216 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 SV2AQ7L0J3 742 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 TSEN2Q8NCE0 465 aaKnown RBP18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 TPCN2Q8NHX9 752 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 OLIG1Q8TAK6 271 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 TAF4BQ92750 862 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 DPF3Q92784 378 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 KRT12Q99456 494 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 GDF3Q9NR23 364 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 RGS18Q9NS28 235 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 PRKAG2Q9UGJ0 569 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 ANK1P16157 1881 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 ZSCAN5CA6NGD5 496 aaPredicted RBP18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 ENPP3O14638 875 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 KCNK3O14649 394 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 EVI5O60447 810 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 KIF4AO95239 1232 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 H2AFZP0C0S5 128 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 CARSP49589 748 aaKnown RBP18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 MXI1P50539 228 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 TDRD10Q5VZ19 366 aaKnown RBP18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 EMBQ6PCB8 327 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 AGMOQ6ZNB7 445 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 H2AFVQ71UI9 128 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 VPS36Q86VN1 386 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 LNX1Q8TBB1 728 aaPredicted RBP18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 TAS1R2Q8TE23 839 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 BADQ92934 168 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 C18orf25Q96B23 403 aaPredicted RBP18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 KIF12Q96FN5 646 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 SNX27Q96L92 541 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 GAD1Q99259 594 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 CGRRF1Q99675 332 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 DNAJC12Q9UKB3 198 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 INPP5FQ9Y2H2 1132 aa18.11■□□□□ 0.49
CDKN1A-201ENST00000244741 F8VZ95 297 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 CLSTN1O94985 981 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 CXCL10P02778 98 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 SOX5P35711 763 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 DRAP1Q14919 205 aaPredicted RBP18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 IFI16Q16666 785 aaKnown RBP18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 SLC24A5Q71RS6 500 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 TMCO2Q7Z6W1 182 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms