RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 NOMO3P69849 1222 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 CMPK2Q5EBM0 449 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 SRRM1Q8IYB3 904 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 GRK7Q8WTQ7 553 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 FAM81BQ96LP2 452 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 GMLQ99445 158 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 PLCD4Q9BRC7 762 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 ASIC3Q9UHC3 531 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 ZMYND8Q9ULU4 1186 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 FAM47DPA6NHR8 397 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 EIF4E1BA6NMX2 242 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 HNRNPDLO14979 420 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 THAP12O43422 761 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 EDF1O60869 148 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 PDK4Q16654 411 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 ANKRD20A2Q5SQ80 823 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 ANKRD20A1Q5TYW2 823 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 ANKRD20A3Q5VUR7 823 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 ARHGEF18Q6ZSZ5 1173 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 C9orf72Q96LT7 481 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 APOBEC3GQ9HC16 384 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 SLCO1B3Q9NPD5 702 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 UBN1Q9NPG3 1134 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 NOP53Q9NZM5 478 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 ARHGAP28Q9P2N2 729 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 FARP1Q9Y4F1 1045 aaPredicted RBP12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 SIGLEC16A6NMB1 481 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 ATF2P15336 505 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 YY1P25490 414 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 PTPN7P35236 360 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 MAGEA4P43358 317 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 PSMC4P43686 418 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 GRIK3Q13003 919 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 PGM5Q15124 567 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 MTERF2Q49AM1 385 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 PPP1R15BQ5SWA1 713 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 PHF13Q86YI8 300 aaPredicted RBP12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 EXD1Q8NHP7 514 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 NT5C1BQ96P26 610 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 SENP7Q9BQF6 1050 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 FEM1BQ9UK73 627 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 LIN7AO14910 233 aaPredicted RBP12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 ZNF862O60290 1169 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 DIAPH2O60879 1101 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 CD58P19256 250 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 ACOT2P49753 483 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 ZNF132P52740 706 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 GPX6P59796 221 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 PLCB3Q01970 1234 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 SLC1A5Q15758 541 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 ZACNQ401N2 412 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 RNASEH2BQ5TBB1 312 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 TDRD10Q5VZ19 366 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 IZUMO3Q5VZ72 239 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 SH2D5Q6ZV89 423 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 ENOSF1Q7L5Y1 443 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 XPNPEP1Q9NQW7 623 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 BATF3Q9NR55 127 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 ANKEF1Q9NU02 776 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 PCDHB2Q9Y5E7 798 aa12.66□□□□□ -0.38
SEC61A1-201ENST00000243253 ZNF541Q9H0D2 1346 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 DNALI1O14645 258 aaPredicted RBP12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 RPA3P35244 121 aaPredicted RBP12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 SPOPLQ6IQ16 392 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 FAM160B2Q86V87 743 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 ALLCQ8N6M5 410 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 SYTL5Q8TDW5 730 aaPredicted RBP12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 CHURC1Q8WUH1 139 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 MAIP1Q8WWC4 291 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 TAAR1Q96RJ0 339 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 PHTF1Q9UMS5 762 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 A0A0G2JMZ2 1700 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 LRRC37A2A6NM11 1700 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 CSDE1O75534 798 aaKnown RBP12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 STRN3Q13033 797 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 MTMR2Q13614 643 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 SCARA5Q6ZMJ2 495 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 INPP5DQ92835 1189 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 VCPIP1Q96JH7 1222 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 RBM15Q96T37 977 aaKnown RBP eCLIP12.65□□□□□ -0.385e-6■■□□□ 14.2
SEC61A1-201ENST00000243253 FAM213AQ9BRX8 229 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 OSBPL8Q9BZF1 889 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 DNPEPQ9ULA0 475 aa12.65□□□□□ -0.38
SEC61A1-201ENST00000243253 CLUHO75153 1309 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 PIK3R2O00459 728 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 ZSCAN5DPP0CG00 497 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 TPBGLP0DKB5 382 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 ADCY8P40145 1251 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 BLMHQ13867 455 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 PKN2Q16513 984 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 P3H1Q32P28 736 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 ATP13A4Q4VNC1 1196 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 ARHGEF16Q5VV41 709 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 SLC17A8Q8NDX2 589 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 CEP170P1Q96L14 293 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 SLITRK1Q96PX8 696 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 IWS1Q96ST2 819 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 MAK16Q9BXY0 300 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 FOXP3Q9BZS1 431 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 KIAA1683Q9H0B3 1180 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms