RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 ARHGAP44Q17R89 818 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 MARCH8Q5T0T0 291 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 CDCA2Q69YH5 1023 aaPredicted RBP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 JADE1Q6IE81 842 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 SHC4Q6S5L8 630 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 MRPL10Q7Z7H8 261 aaKnown RBP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 TTC30AQ86WT1 665 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 ZNF557Q8N988 423 aaPredicted RBP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 HDAC7Q8WUI4 952 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 MFSD14AQ96MC6 490 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 CDHR5Q9HBB8 845 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 IFT122Q9HBG6 1241 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 KBTBD4Q9NVX7 518 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 FARP1Q9Y4F1 1045 aaPredicted RBP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 MORC2Q9Y6X9 1032 aaPredicted RBP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 SMCHD1A6NHR9 2005 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 ZNF263O14978 683 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 APOEP02649 317 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 ERCC5P28715 1186 aaPredicted RBP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 UBXN1Q04323 297 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 SPIRE1Q08AE8 756 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 NPY5RQ15761 445 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 TRIM71Q2Q1W2 868 aaKnown RBP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 SLC39A12Q504Y0 691 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 TOGARAM2Q6ZUX3 1019 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 TRAPPC11Q7Z392 1133 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 SPATA18Q8TC71 538 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 NXPE3Q969Y0 559 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 TRAIPQ9BWF2 469 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 MTMR12Q9C0I1 747 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 NUCKS1Q9H1E3 243 aaKnown RBP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 TMEM8AQ9HCN3 771 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 TMEM51Q9NW97 253 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 ZDHHC7Q9NXF8 308 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 CDH9Q9ULB4 789 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 GRM6O15303 877 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 THAP12O43422 761 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 RHOBTB3O94955 611 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 MBL2P11226 248 aaPredicted RBP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 MYOGP15173 224 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 TNFAIP3P21580 790 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 ADORA2BP29275 332 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 STAT1P42224 750 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 NOP2P46087 812 aaKnown RBP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 BRCC3P46736 316 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 GATMP50440 423 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 ST8SIA6P61647 398 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 MGAT3Q09327 533 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 MORC3Q14149 939 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 SPA17Q15506 151 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 VARS2Q5ST30 1063 aaKnown RBP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 CFAP58Q5T655 872 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 LMBRD2Q68DH5 695 aaPredicted RBP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 TMCO2Q7Z6W1 182 aaPredicted RBP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 GPR65Q8IYL9 337 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 GJD3Q8N144 294 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 EFHBQ8N7U6 833 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 ZBTB45Q96K62 511 aaPredicted RBP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 SNX27Q96L92 541 aa5.64□□□□□ -1.51
RUFY3-201ENST00000226328 TIMM13Q9Y5L4 95 aaPredicted RBP5.64□□□□□ -1.51
RUFY3-201ENST00000226328 A0A0B4J269 797 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 RFXAPO00287 272 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 IKBKBO14920 756 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 P4HA2O15460 535 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 ITGB1P05556 798 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 NFKBIAP25963 317 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 PBX3P40426 434 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 RECQLP46063 649 aaPredicted RBP5.63□□□□□ -1.51
RUFY3-201ENST00000226328 CCDC15Q0P6D6 951 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 MAN2A1Q16706 1144 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 NT5DC1Q5TFE4 455 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 DCUN1D2Q6PH85 259 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 FRMD5Q7Z6J6 570 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 FILIP1Q7Z7B0 1213 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 GRAMD1CQ8IYS0 662 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 TOP6BLQ8N6T0 577 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 MRPL43Q8N983 215 aaKnown RBP5.63□□□□□ -1.51
RUFY3-201ENST00000226328 GANCQ8TET4 914 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 MRRFQ96E11 262 aaKnown RBP5.63□□□□□ -1.51
RUFY3-201ENST00000226328 PGLYRP2Q96PD5 576 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 BLOC1S4Q9NUP1 217 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 CPSF3Q9UKF6 684 aaKnown RBP5.63□□□□□ -1.51
RUFY3-201ENST00000226328 HTTP42858 3142 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 CCDC195A0A1B0GUA6 201 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.63□□□□□ -1.51
RUFY3-201ENST00000226328 CCL16O15467 120 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 DAPK3O43293 454 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 AP1G2O75843 785 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 HLA-DRAP01903 254 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 KCNE1P15382 129 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 ACADSBP45954 432 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 EPHB4P54760 987 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 NOP14P78316 857 aaKnown RBP5.63□□□□□ -1.51
RUFY3-201ENST00000226328 FAM189BP81408 668 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 ADCY1Q08828 1119 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 PSMD6Q15008 389 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 VSTM1Q6UX27 236 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 AGMOQ6ZNB7 445 aa5.63□□□□□ -1.51
RUFY3-201ENST00000226328 SPPL3Q8TCT6 385 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms