RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 EXD1Q8NHP7 514 aa19.58■□□□□ 0.72
CACTIN-201ENST00000221899 SMC6Q96SB8 1091 aa19.58■□□□□ 0.72
CACTIN-201ENST00000221899 KIAA1683Q9H0B3 1180 aa19.58■□□□□ 0.72
CACTIN-201ENST00000221899 APOBEC3GQ9HC16 384 aaKnown RBP19.58■□□□□ 0.72
CACTIN-201ENST00000221899 SLC5A4Q9NY91 659 aa19.58■□□□□ 0.72
CACTIN-201ENST00000221899 DNALI1O14645 258 aaPredicted RBP19.57■□□□□ 0.72
CACTIN-201ENST00000221899 IFNB1P01574 187 aa19.57■□□□□ 0.72
CACTIN-201ENST00000221899 KRT1P04264 644 aa19.57■□□□□ 0.72
CACTIN-201ENST00000221899 NLRP11P59045 1033 aaKnown RBP19.57■□□□□ 0.72
CACTIN-201ENST00000221899 C15orf39Q6ZRI6 1047 aa19.57■□□□□ 0.72
CACTIN-201ENST00000221899 ZNF677Q86XU0 584 aa19.57■□□□□ 0.72
CACTIN-201ENST00000221899 RELL1Q8IUW5 271 aa19.57■□□□□ 0.72
CACTIN-201ENST00000221899 ANKMY2Q8IV38 441 aa19.57■□□□□ 0.72
CACTIN-201ENST00000221899 OGFOD1Q8N543 542 aa19.57■□□□□ 0.72
CACTIN-201ENST00000221899 DENND1AQ8TEH3 1009 aa19.57■□□□□ 0.72
CACTIN-201ENST00000221899 STARD13Q9Y3M8 1113 aa19.57■□□□□ 0.72
CACTIN-201ENST00000221899 COL2A1P02458 1487 aaPredicted RBP19.57■□□□□ 0.72
CACTIN-201ENST00000221899 LIG4P49917 911 aa19.57■□□□□ 0.72
CACTIN-201ENST00000221899 CCDC15Q0P6D6 951 aa19.57■□□□□ 0.72
CACTIN-201ENST00000221899 ABRAQ8N0Z2 381 aa19.57■□□□□ 0.72
CACTIN-201ENST00000221899 FAXDC2Q96IV6 333 aa19.57■□□□□ 0.72
CACTIN-201ENST00000221899 RAB3IPQ96QF0 476 aaPredicted RBP19.57■□□□□ 0.72
CACTIN-201ENST00000221899 FAM167BQ9BTA0 163 aa19.57■□□□□ 0.72
CACTIN-201ENST00000221899 MRPL47Q9HD33 250 aaKnown RBP19.57■□□□□ 0.72
CACTIN-201ENST00000221899 VNN1O95497 513 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 CBX6O95503 412 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 ABHD2P08910 425 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 ACO1P21399 889 aaKnown RBP19.56■□□□□ 0.72
CACTIN-201ENST00000221899 SKIV2L2P42285 1042 aaKnown RBP19.56■□□□□ 0.72
CACTIN-201ENST00000221899 BPIFB4P59827 614 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 MOGSQ13724 837 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 ARHGEF16Q5VV41 709 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 TXNRD3NBQ6F5E7 133 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 LRRC8CQ8TDW0 803 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 C10orf88Q9H8K7 445 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 USH1CQ9Y6N9 552 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 WDR91A4D1P6 747 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 ZC3H11AO75152 810 aaKnown RBP eCLIP19.56■□□□□ 0.72
CACTIN-201ENST00000221899 FGFR1P11362 822 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 KRT76Q01546 638 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 PLCB3Q01970 1234 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 EFTUD2Q15029 972 aaKnown RBP eCLIP19.56■□□□□ 0.721e-7■■■■■ 52.3
CACTIN-201ENST00000221899 RIBC1Q8N443 379 aaPredicted RBP19.56■□□□□ 0.72
CACTIN-201ENST00000221899 SLITRK1Q96PX8 696 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 PDCD2LQ9BRP1 358 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 SLC24A3Q9HC58 644 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 SEPT9Q9UHD8 586 aaPredicted RBP19.56■□□□□ 0.72
CACTIN-201ENST00000221899 IVNS1ABPQ9Y6Y0 642 aa19.56■□□□□ 0.72
CACTIN-201ENST00000221899 SFNP31947 248 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 YARSP54577 528 aaKnown RBP19.55■□□□□ 0.72
CACTIN-201ENST00000221899 PDIA2Q13087 525 aaKnown RBP19.55■□□□□ 0.72
CACTIN-201ENST00000221899 CUL2Q13617 745 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 ZACNQ401N2 412 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 ZBTB41Q5SVQ8 909 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 SWSAP1Q6NVH7 229 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 RBBP8NLQ8NC74 664 aaPredicted RBP19.55■□□□□ 0.72
CACTIN-201ENST00000221899 SPIRE2Q8WWL2 714 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 NTPCRQ9BSD7 190 aaKnown RBP19.55■□□□□ 0.72
CACTIN-201ENST00000221899 TMEM121Q9BTD3 319 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 MOV10L1Q9BXT6 1211 aaKnown RBP19.55■□□□□ 0.72
CACTIN-201ENST00000221899 C12orf65Q9H3J6 166 aaKnown RBP19.55■□□□□ 0.72
CACTIN-201ENST00000221899 XPNPEP1Q9NQW7 623 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 PCDHA10Q9Y5I2 948 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 GAD2Q05329 585 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 SEZ6Q53EL9 994 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 PLEKHA7Q6IQ23 1121 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 SAMD3Q8N6K7 520 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 FEZF2Q8TBJ5 459 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 ZBTB45Q96K62 511 aaPredicted RBP19.55■□□□□ 0.72
CACTIN-201ENST00000221899 MAK16Q9BXY0 300 aaKnown RBP19.55■□□□□ 0.72
CACTIN-201ENST00000221899 TRIM6Q9C030 488 aaPredicted RBP19.55■□□□□ 0.72
CACTIN-201ENST00000221899 POLR3FQ9H1D9 316 aaPredicted RBP19.55■□□□□ 0.72
CACTIN-201ENST00000221899 LRMDAQ9H2I8 198 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 F8VP50 259 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 ONECUT3O60422 494 aaPredicted RBP19.55■□□□□ 0.72
CACTIN-201ENST00000221899 EDF1O60869 148 aaKnown RBP19.55■□□□□ 0.72
CACTIN-201ENST00000221899 C4BPAP04003 597 aaKnown RBP19.55■□□□□ 0.72
CACTIN-201ENST00000221899 GARTP22102 1010 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 EPHB2P29323 1055 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 EAPPQ56P03 285 aaPredicted RBP19.55■□□□□ 0.72
CACTIN-201ENST00000221899 HHATQ5VTY9 493 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 NLRX1Q86UT6 975 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 MICAL1Q8TDZ2 1067 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 SENP7Q9BQF6 1050 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 PXMP2Q9NR77 195 aa19.55■□□□□ 0.72
CACTIN-201ENST00000221899 ZMYND8Q9ULU4 1186 aaPredicted RBP19.55■□□□□ 0.72
CACTIN-201ENST00000221899 H0Y3Z8 333 aa19.54■□□□□ 0.72
CACTIN-201ENST00000221899 EXTL3O43909 919 aa19.54■□□□□ 0.72
CACTIN-201ENST00000221899 POTEJP0CG39 1038 aa19.54■□□□□ 0.72
CACTIN-201ENST00000221899 CETN2P41208 172 aa19.54■□□□□ 0.72
CACTIN-201ENST00000221899 TAF11Q15544 211 aa19.54■□□□□ 0.72
CACTIN-201ENST00000221899 PDK4Q16654 411 aa19.54■□□□□ 0.72
CACTIN-201ENST00000221899 TRIM68Q6AZZ1 485 aa19.54■□□□□ 0.72
CACTIN-201ENST00000221899 LONP2Q86WA8 852 aa19.54■□□□□ 0.72
CACTIN-201ENST00000221899 ALLCQ8N6M5 410 aa19.54■□□□□ 0.72
CACTIN-201ENST00000221899 SAE1Q9UBE0 346 aaPredicted RBP19.54■□□□□ 0.72
CACTIN-201ENST00000221899 ZNF541Q9H0D2 1346 aa19.54■□□□□ 0.72
CACTIN-201ENST00000221899 SGK1O00141 431 aa19.54■□□□□ 0.72
CACTIN-201ENST00000221899 MAGEB2O15479 319 aa19.54■□□□□ 0.72
CACTIN-201ENST00000221899 PRPF4O43172 522 aaKnown RBP eCLIP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms