RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 KIAA1683Q9H0B3 1180 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 IMPAD1Q9NX62 359 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 DNMBPQ6XZF7 1577 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 ATP6V1C1P21283 382 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 POLA2Q14181 598 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 ZSWIM7Q19AV6 140 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 WNK4Q96J92 1243 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 FAM111AQ96PZ2 611 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 NRDE2Q9H7Z3 1164 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 GNPATO15228 680 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 BNC2Q6ZN30 1099 aaPredicted RBP11.56□□□□□ -0.56
USP31-201ENST00000219689 USP38Q8NB14 1042 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 PICK1Q9NRD5 415 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 NPATQ14207 1427 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 SPANXN2Q5MJ10 180 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 BTN2A2Q8WVV5 523 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 NXF1Q9UBU9 619 aaKnown RBP11.56□□□□□ -0.56
USP31-201ENST00000219689 IREB2P48200 963 aaKnown RBP11.56□□□□□ -0.56
USP31-201ENST00000219689 LPIN1Q14693 890 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 ZBTB46Q86UZ6 589 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 ARID3BQ8IVW6 561 aaPredicted RBP11.56□□□□□ -0.56
USP31-201ENST00000219689 GPHNQ9NQX3 736 aaPredicted RBP11.56□□□□□ -0.56
USP31-201ENST00000219689 TFCP2L1Q9NZI6 479 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 GGA2Q9UJY4 613 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 CNOT3O75175 753 aaKnown RBP11.56□□□□□ -0.56
USP31-201ENST00000219689 TP53BP2Q13625 1128 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 CTTNQ14247 550 aaKnown RBP11.56□□□□□ -0.56
USP31-201ENST00000219689 C11orf88Q6PI97 169 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 KLHL32Q96NJ5 620 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 ELOVL6Q9H5J4 265 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 MROH7-TTC4A0A0A0MT08 1334 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 PDK3Q15120 406 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 EZH2Q15910 746 aaKnown RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 DGUOKQ16854 277 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 UNC13DQ70J99 1090 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 PLBD2Q8NHP8 589 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 E2F7Q96AV8 911 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 APOL4Q9BPW4 351 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 TRAPPC3O43617 180 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 PLEKP08567 350 aaPredicted RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 TFAMQ00059 246 aaKnown RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 NFIL3Q16649 462 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 ARHGEF16Q5VV41 709 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 PODNQ7Z5L7 613 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 DEFB107AQ8IZN7 70 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 COPG2Q9UBF2 871 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 RSL24D1Q9UHA3 163 aaKnown RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 DUSP10Q9Y6W6 482 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 PLCH2O75038 1416 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 A0A1W2PQC6 194 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 SAC3D1A6NKF1 404 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 TRIM64CA6NLI5 447 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 A8MUI8 341 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 ABATP80404 500 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 OR6Y1Q8NGX8 325 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 SARS2Q9NP81 518 aaKnown RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 CROCC2H7BZ55 1655 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 ADGRA2Q96PE1 1338 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 SPDYE5A6NIY4 337 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 HEXIM2Q96MH2 286 aaKnown RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 RWDD4Q6NW29 188 aaKnown RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 NECAB2Q7Z6G3 386 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 C18orf8Q96DM3 657 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 CCDC59Q9P031 241 aaKnown RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 IL13P35225 146 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 LBRQ14739 615 aaKnown RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 POLR1BQ9H9Y6 1135 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 ZC3H7BQ9UGR2 993 aaKnown RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 KDM5BQ9UGL1 1544 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 PTPREP23469 700 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 KCNJ1P48048 391 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 COASYQ13057 564 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 NRF1Q16656 503 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 NLRX1Q86UT6 975 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 CPXCR1Q8N123 301 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 ZSCAN18Q8TBC5 510 aaPredicted RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 FAM149B1Q96BN6 582 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 CEP95Q96GE4 821 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 NGRNQ9NPE2 291 aaKnown RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 SEPT9Q9UHD8 586 aaPredicted RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 PCSK1NQ9UHG2 260 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 CHKBQ9Y259 395 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 PCDH11XQ9BZA7 1347 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 KCNN4O15554 427 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 APRTP07741 180 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 DPP8Q6V1X1 898 aaPredicted RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 GIMAP8Q8ND71 665 aaPredicted RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 NYXQ9GZU5 481 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 JMJD4Q9H9V9 463 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 KMT5AQ9NQR1 393 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 BTBD3Q9Y2F9 522 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 LEMD3Q9Y2U8 911 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 ATXN2Q99700 1313 aaKnown RBP11.55□□□□□ -0.56
USP31-201ENST00000219689 ABCA10Q8WWZ4 1543 aa11.55□□□□□ -0.56
USP31-201ENST00000219689 PDE9AO76083 593 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 C6orf10Q5SRN2 563 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 TDRKHQ9Y2W6 561 aaKnown RBP11.54□□□□□ -0.56
USP31-201ENST00000219689 ZNF263O14978 683 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 EIF3EP60228 445 aaKnown RBP11.54□□□□□ -0.56
USP31-201ENST00000219689 TTC13Q8NBP0 860 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms