RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ZACNQ401N2 412 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 HP1BP3Q5SSJ5 553 aaPredicted RBP18.29■□□□□ 0.52
USB1-201ENST00000219281 ZFYVE27Q5T4F4 411 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 RNF43Q68DV7 783 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 SWSAP1Q6NVH7 229 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 TMEM270Q6UE05 265 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 ECHDC2Q86YB7 292 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 ABRAQ8N0Z2 381 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 MAML1Q92585 1016 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.29■□□□□ 0.52
USB1-201ENST00000219281 PTPRJQ12913 1337 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 EXOC1LA0A1B0GW35 172 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 FAM47DPA6NHR8 397 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 VWA5AO00534 786 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 VNN1O95497 513 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 ANP32DO95626 131 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 ZSCAN5DPP0CG00 497 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 GNA15P30679 374 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 BACE1P56817 501 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 NLRP11P59045 1033 aaKnown RBP18.29■□□□□ 0.52
USB1-201ENST00000219281 PSMD6Q15008 389 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 ANGEL2Q5VTE6 544 aaKnown RBP18.29■□□□□ 0.52
USB1-201ENST00000219281 ASRGL1Q7L266 308 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 ATG4CQ96DT6 458 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 THOC1Q96FV9 657 aaKnown RBP18.29■□□□□ 0.52
USB1-201ENST00000219281 FHDC1Q9C0D6 1143 aaPredicted RBP18.29■□□□□ 0.52
USB1-201ENST00000219281 APOBEC3GQ9HC16 384 aaKnown RBP18.29■□□□□ 0.52
USB1-201ENST00000219281 SEPT9Q9UHD8 586 aaPredicted RBP18.29■□□□□ 0.52
USB1-201ENST00000219281 PTPRAP18433 802 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 GCAP28676 217 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 CLDN10P78369 228 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 ENPEPQ07075 957 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 PLEKHA7Q6IQ23 1121 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 CCDC125Q86Z20 511 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 SCYL3Q8IZE3 742 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 ANKLE1Q8NAG6 615 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 L3MBTL3Q96JM7 780 aaPredicted RBP18.28■□□□□ 0.52
USB1-201ENST00000219281 CFAP57Q96MR6 1250 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 POLR3FQ9H1D9 316 aaPredicted RBP18.28■□□□□ 0.52
USB1-201ENST00000219281 PDLIM7Q9NR12 457 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 DNPEPQ9ULA0 475 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 POC1B-GALNT4F8VUJ3 575 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 DGAT1O75907 488 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 ABHD2P08910 425 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 POTEJP0CG39 1038 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 ETS1P14921 441 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 TCF4P15884 667 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 MSH2P43246 934 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 NFX1Q12986 1120 aaKnown RBP18.28■□□□□ 0.52
USB1-201ENST00000219281 CUL2Q13617 745 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 MCPH1Q8NEM0 835 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 NLGN2Q8NFZ4 835 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 RDM1Q8NG50 284 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 FEZF2Q8TBJ5 459 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 TRPM4Q8TD43 1214 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 NSMCE1Q8WV22 266 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 ATP6V0A1Q93050 837 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 GRAMD1AQ96CP6 724 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 ARHGAP28Q9P2N2 729 aa18.28■□□□□ 0.52
USB1-201ENST00000219281 LIASO43766 372 aa18.27■□□□□ 0.52
USB1-201ENST00000219281 ATF7P17544 494 aaPredicted RBP18.27■□□□□ 0.52
USB1-201ENST00000219281 CLNS1AP54105 237 aaKnown RBP18.27■□□□□ 0.52
USB1-201ENST00000219281 BAATQ14032 418 aaPredicted RBP18.27■□□□□ 0.52
USB1-201ENST00000219281 TRIM72Q6ZMU5 477 aa18.27■□□□□ 0.52
USB1-201ENST00000219281 TRABD2AQ86V40 505 aa18.27■□□□□ 0.52
USB1-201ENST00000219281 PHF13Q86YI8 300 aaPredicted RBP18.27■□□□□ 0.52
USB1-201ENST00000219281 RIBC1Q8N443 379 aaPredicted RBP18.27■□□□□ 0.52
USB1-201ENST00000219281 WRNIP1Q96S55 665 aa18.27■□□□□ 0.52
USB1-201ENST00000219281 SENP7Q9BQF6 1050 aa18.27■□□□□ 0.52
USB1-201ENST00000219281 ZNF148Q9UQR1 794 aa18.27■□□□□ 0.52
USB1-201ENST00000219281 SCINQ9Y6U3 715 aa18.27■□□□□ 0.52
USB1-201ENST00000219281 DNALI1O14645 258 aaPredicted RBP18.26■□□□□ 0.51
USB1-201ENST00000219281 CETN2P41208 172 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 RPL7AP62424 266 aaKnown RBP18.26■□□□□ 0.51
USB1-201ENST00000219281 LMNB2Q03252 620 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 ACVR2BQ13705 512 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 FASTKD3Q14CZ7 662 aaKnown RBP18.26■□□□□ 0.51
USB1-201ENST00000219281 CAPN12Q6ZSI9 719 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 RBBP8NLQ8NC74 664 aaPredicted RBP18.26■□□□□ 0.51
USB1-201ENST00000219281 ZNF280CQ8ND82 737 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 FOXP3Q9BZS1 431 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 KIAA1586Q9HCI6 787 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 AGO2Q9UKV8 859 aaKnown RBP18.26■□□□□ 0.51
USB1-201ENST00000219281 C15orf41Q9Y2V0 281 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 SRCAPQ6ZRS2 3230 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 ZBED4O75132 1171 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 ASMTLO95671 621 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 NR3C2P08235 984 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 CCND2P30279 289 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 ARSEP51690 589 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 DNAJC3Q13217 504 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 DCAF15Q66K64 600 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 FBXO41Q8TF61 875 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 SPOCK2Q92563 424 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 RSRC1Q96IZ7 334 aaKnown RBP18.26■□□□□ 0.51
USB1-201ENST00000219281 VCPIP1Q96JH7 1222 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 ZBTB45Q96K62 511 aaPredicted RBP18.26■□□□□ 0.51
USB1-201ENST00000219281 SLITRK1Q96PX8 696 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 HAPLN2Q9GZV7 340 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 KIF9Q9HAQ2 790 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms