RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Krt71Q9R0H5 524 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Gm7995L7N2E4 160 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Chmp6P0C0A3 200 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Ptk2P34152 1090 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 March4Q80TE3 409 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Rccd1Q8BTU7 377 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Hdhd5Q91WM2 419 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Ctu1Q99J10 420 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Med7Q9CZB6 233 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Cul2Q9D4H8 745 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Gtf2ird1Q9JI57 1104 aaKnown RBP29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Rnf4Q9QZS2 194 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Cdr2lA2A6T1 465 aa29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Cops2P61202 443 aaKnown RBP29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Lhx5P61375 402 aa29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 SbdsP70122 250 aa29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Smarcad1Q04692 1021 aa29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Ttc9Q3V038 219 aa29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 FcgrtQ61559 365 aa29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Pkp2Q9CQ73 795 aaKnown RBP29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Ddx24Q9ESV0 857 aaKnown RBP29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Slc22a3Q9WTW5 551 aa29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Ercc5P35689 1170 aa29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Lrch2Q3UMG5 773 aa29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 TwistnbQ78WZ7 330 aaKnown RBP29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Dus1lQ8C2P3 475 aa29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Atp13a1Q9EPE9 1200 aaKnown RBP29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Hic1Q9R1Y5 733 aa29.43■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Nr2c2P49117 596 aa29.42■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Smyd1P97443 490 aa29.42■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Pid1Q3UBG2 217 aa29.42■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Rrp36Q3UFY0 244 aaKnown RBP29.42■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Cyp2j11Q3UNV2 504 aa29.42■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Olfr392Q7TRX6 312 aa29.42■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Daam2Q80U19 1115 aa29.42■■■□□ 2.3
Ldb1-208ENSMUST00000185355 AarsQ8BGQ7 968 aa29.42■■■□□ 2.3
Ldb1-208ENSMUST00000185355 UvragQ8K245 698 aa29.42■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Ubxn2aQ99KJ0 258 aa29.42■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Cdk5rap3Q99LM2 503 aa29.42■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Rnf135Q9CWS1 417 aa29.42■■■□□ 2.3
Ldb1-208ENSMUST00000185355 RpainQ9CWY9 219 aa29.42■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Patl2A2ARM1 529 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 PotegA5H0M4 473 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Gm17535J3KMR8 224 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Casq2O09161 415 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Pkn1P70268 946 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Btg1-ps1Q3V0S2 161 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Btg1-ps2Q3V0X0 161 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Gemin4Q6P6L6 1058 aaKnown RBP29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 PrcpQ7TMR0 491 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Zbed4Q80WQ9 1168 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Lrrc24Q8BHA1 521 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Daam1Q8BPM0 1077 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Def6Q8C2K1 630 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Polr2bQ8CFI7 1174 aaKnown RBP29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Tas1r1Q99PG6 842 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Nfu1Q9QZ23 255 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Phf2Q9WTU0 1096 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Kng1O08677 661 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Msh2P43247 935 aaKnown RBP29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Tcf4Q60722 670 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Znf467Q8JZL0 594 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Ivns1abpQ920Q8 642 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Me2Q99KE1 589 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Cuedc2Q9CXX9 284 aa29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Ccdc124Q9D8X2 217 aaKnown RBP29.41■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Smim10l2aA0A0B4J1F8 78 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Speer2E9Q9U2 264 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Q3UE31 404 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Kctd16Q5DTY9 427 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Atg9bQ6EBV9 922 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Hectd2Q8CDU6 774 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Fbxo33Q8VE08 562 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Olfr1502Q8VG66 316 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Fam133bQ9CVI2 245 aaKnown RBP29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Mcur1Q9CXD6 340 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Znf687Q9D2D7 1237 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Apol7bB1AQP7 369 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Casp14O89094 257 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Apol7eQ3UZ24 369 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Ccdc117Q6PB51 277 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Celf6Q7TN33 460 aaKnown RBP29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Phf8Q80TJ7 1023 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Trnp1Q80ZI1 223 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Rassf10Q8BL43 508 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Nlrp4aQ8BU40 982 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Tmem120aQ8C1E7 343 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Fam118bQ8C569 351 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Bcs1lQ9CZP5 418 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Rnf138rt1Q9D9M9 248 aa29.4■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Tatdn2B7ZNL9 783 aaKnown RBP29.39■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Lipo2D3YY49 398 aa29.39■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Scp2P32020 547 aaKnown RBP29.39■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Pi4k2aQ2TBE6 479 aa29.39■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Slc16a10Q3U9N9 512 aa29.39■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Fam189a2Q4FZH1 290 aa29.39■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Icam5Q60625 917 aa29.39■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Syt15Q8C6N3 418 aa29.39■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Itm2cQ91VK4 269 aa29.39■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Q9CQC3 228 aa29.39■■■□□ 2.3
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms