RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Kcnq1P97414 668 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Smyd1P97443 490 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Pde1cQ64338 706 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Gucy2gQ6TL19 1100 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Zic5Q7TQ40 622 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Creb3l2Q8BH52 521 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Tmem145Q8C4U2 746 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Polr2bQ8CFI7 1174 aaKnown RBP16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Dennd1aQ8K382 1016 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 PollQ9QXE2 573 aaKnown RBP16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 SktA2AQ25 1946 aaKnown RBP16.83■□□□□ 0.29
Trim39-203ENSMUST00000113706 Arhgef10Q8C033 1345 aa16.83■□□□□ 0.29
Trim39-203ENSMUST00000113706 Asprv1Q09PK2 339 aa16.83■□□□□ 0.29
Trim39-203ENSMUST00000113706 Ntan1Q64311 310 aa16.83■□□□□ 0.29
Trim39-203ENSMUST00000113706 Gja6Q6S5G4 283 aa16.83■□□□□ 0.29
Trim39-203ENSMUST00000113706 Gigyf2Q6Y7W8 1291 aaKnown RBP16.83■□□□□ 0.29
Trim39-203ENSMUST00000113706 Zfyve28Q6ZPK7 905 aa16.83■□□□□ 0.29
Trim39-203ENSMUST00000113706 Wdtc1Q80ZK9 677 aa16.83■□□□□ 0.29
Trim39-203ENSMUST00000113706 LppQ8BFW7 613 aa16.83■□□□□ 0.29
Trim39-203ENSMUST00000113706 Gcfc2Q8BKT3 769 aa16.83■□□□□ 0.29
Trim39-203ENSMUST00000113706 Phka2Q8BWJ3 1235 aa16.83■□□□□ 0.29
Trim39-203ENSMUST00000113706 Tph2Q8CGV2 488 aa16.83■□□□□ 0.29
Trim39-203ENSMUST00000113706 Olfr393Q8VGR6 312 aa16.83■□□□□ 0.29
Trim39-203ENSMUST00000113706 Ep400Q8CHI8 3072 aaKnown RBP16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Dab2ipQ3UHC7 1189 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Zfp90Q61967 636 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Gm5622Q810Q0 167 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Dpp9Q8BVG4 862 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Btbd6Q8K2J9 488 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Grhl1Q921D9 618 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 PawrQ925B0 333 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Lztr1Q9CQ33 837 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 MlklQ9D2Y4 472 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Gm3182K7N6T8 263 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Chmp6P0C0A3 200 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Cetn1P41209 172 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Tax1bp1Q3UKC1 814 aaKnown RBP16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Slc20a2Q80UP8 656 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Tspan18Q80WR1 248 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Apol9bQ8C7I4 310 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Apol9aQ8VDU3 310 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Zfp64Q99KE8 643 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ascc1Q9D8Z1 356 aaKnown RBP16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Efcab12V9GXH0 673 aa16.83■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ppfia4B8QI36 1187 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Gm1661E9Q963 441 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mmp3P28862 477 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mark3Q03141 753 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Fscn2Q32M02 492 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mphosph8Q3TYA6 858 aaKnown RBP16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ppp2r5eQ61151 467 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 FtoQ8BGW1 502 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Agap1Q8BXK8 857 aaKnown RBP16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Tom1l1Q923U0 474 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Cyp27b1O35084 507 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Rpl7aP12970 266 aaKnown RBP16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Shmt1P50431 478 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 YwhaeP62259 255 aaKnown RBP16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Lrch2Q3UMG5 773 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Jade3Q6IE82 823 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Lsm8Q6ZWM4 96 aaKnown RBP16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Kbtbd3Q8BHI4 607 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mical2Q8BML1 960 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 C130026I21RikQ8C898 291 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mtmr14Q8VEL2 648 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 CarfQ8VHI4 689 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 GzmnQ920S1 248 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Pdxdc1Q99K01 787 aaKnown RBP16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Snx24Q9CRB0 169 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 PirQ9D711 290 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 MefvQ9JJ26 767 aa16.82■□□□□ 0.28
Trim39-203ENSMUST00000113706 Klhl33G3UW92 533 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Pi4k2aQ2TBE6 479 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ddx4Q61496 702 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ints6lQ8BND4 861 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Osbpl1aQ91XL9 950 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Q922R1 422 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Cwc15Q9JHS9 229 aaKnown RBP16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Dnajc12Q9R022 198 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Gucy2dA0A0U1RPR8 1117 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mup10A2BIN1 180 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mup14A2CEK7 180 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mup19A9C497 187 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mup15A9R9W0 180 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mup17B5X0G2 180 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mup8E9PVW0 235 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mup7E9QA79 235 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mup6P02762 180 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mup1P11588 180 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mup2P11589 180 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mief2Q5NCS9 454 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Efl1Q8C0D5 1127 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Adgrg2Q8CJ12 1009 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Vmn1r191Q8K4D0 298 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Wdr81Q5ND34 1934 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Gm28510A0A087WP28 240 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ap1g2O88512 791 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Oaz1P54369 227 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Atp8a1P70704 1164 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Agbl1Q09M05 972 aa16.81■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 89.2 ms