RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Smg5Q6ZPY2 1017 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tdpoz2Q717B2 364 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tas2r109Q7M707 316 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Impg2Q80XH2 1243 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 GlmnQ8BZM1 596 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Arfip2Q8K221 341 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 MyripQ8K3I4 856 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Q8R1Y2 203 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Snapc2Q91XA5 359 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ivns1abpQ920Q8 642 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Cntnap2Q9CPW0 1332 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Smchd1Q6P5D8 2007 aaKnown RBP10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gm6588E9Q3K0 461 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gm5689F6Y2A6 97 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Aoc3O70423 765 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ca8P28651 291 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Scp2P32020 547 aaKnown RBP10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 TdgP56581 421 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 OtulinQ3UCV8 352 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Dzip1lQ499E4 774 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Zfp454Q80Y34 536 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gpc5Q8CAL5 572 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 C8aQ8K182 587 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Olfr1499Q8VG65 314 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Havcr2Q8VIM0 281 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Rabep2Q91WG2 554 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 YarsQ91WQ3 528 aaKnown RBP10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Zfyve19Q9DAZ9 389 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Htra2Q9JIY5 458 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Mettl1Q9Z120 268 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Kcnq2Q9Z351 759 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Irf8P23611 424 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Pdcd2P46718 343 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Lzts1P60853 599 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Flt3Q00342 1000 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 GmpsQ3THK7 693 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gxylt1Q3UHH8 404 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Znf583Q3V080 568 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Phc1Q64028 1012 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Snx19Q6P4T1 997 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gga2Q6P5E6 603 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Serpinb3dQ6UKZ0 387 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Emc2Q9CRD2 297 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Mtmr1Q9Z2C4 669 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Vwa5b1A9Z1V5 1215 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Magea4F2Z493 315 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Cyp2c68K7N6C2 491 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Vmn2r15L7N2A0 855 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Eif3eP60229 445 aaKnown RBP10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Trim43cP86449 446 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Spink5Q148R4 1017 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Dnajc8Q6NZB0 253 aaKnown RBP10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Sh3rf3Q8C120 878 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Pnpt1Q8K1R3 783 aaKnown RBP10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Krt5Q922U2 580 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 MlklQ9D2Y4 472 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Chmp2aQ9DB34 222 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Olig1Q9JKN5 260 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Lypla2Q9WTL7 231 aa10.24□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Plch1Q4KWH5 1682 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Q6GQV0 436 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Fam102aQ78T81 392 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Eif2aQ8BJW6 581 aaKnown RBP10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Olfml3Q8BK62 406 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tesk2Q8VCT9 570 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 NcaldQ91X97 193 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 ChiaQ91XA9 473 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Taf1dQ9D4V4 322 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Nsmce1Q9D720 266 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Xpo7Q9EPK7 1087 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Drg2Q9QXB9 364 aaKnown RBP10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Kif9Q9WV04 790 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Col1a1P11087 1453 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Lrrc73B2RWC4 316 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Pex5O09012 639 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Serpini1O35684 410 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Cyp2j6O54750 501 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Pias1O88907 651 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Fermt1P59113 677 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Actr2P61161 394 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ctc1Q5SUQ9 1212 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Smyd3Q9CWR2 428 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 HemgnQ9ERZ0 503 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Rap1gapA2ALS5 663 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Taf4E9QAP7 1042 aaKnown RBP10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gm3371F7CQW8 167 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Exoc7O35250 697 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Erbb2P70424 1256 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Map3k9Q3U1V8 1077 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Camta2Q80Y50 1208 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Adamts2Q8C9W3 1213 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tdrd1Q99MV1 1172 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Bco2Q99NF1 532 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Castor1Q9CWQ8 331 aa10.23□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Rabgap1A2AWA9 1064 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gm21973F6WEZ7 68 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gm3424L7N298 263 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gm8246M0QWX9 263 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Capn6O35646 641 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tsta3P23591 321 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms