RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Tubgcp3P58854 905 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Yipf3Q3UDR8 347 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gm11437Q5QR91 290 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gucy2gQ6TL19 1100 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Trim17Q7TPM3 477 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Igdcc3Q8BQC3 813 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Dnajc28Q8VCE1 385 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Nfu1Q9QZ23 255 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 C5P06684 1680 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Zscan4-ps1A0A1C7CYV3 506 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gm16430A6X8J1 155 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Zscan4dA7KBS4 506 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mdm4O35618 489 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Eno3P21550 434 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Hsd17b1P51656 344 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Zfp953Q3UPV7 304 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Zscan4fQ3URS2 506 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ccdc85aQ5SP85 500 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Foxd4Q60688 444 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Soat1Q61263 540 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Zscan4cQ80VJ6 506 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Zbed4Q80WQ9 1168 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Nuf2Q99P69 463 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Bap1Q99PU7 728 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Micu3Q9CTY5 523 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Zbtb18Q9WUK6 522 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gabbr1Q9WV18 960 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gm29554A0A087WNW4 188 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 2210011C24RikA0A087WQ89 206 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Hnrnph3D3Z3N4 346 aaKnown RBP10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gm2237E9Q501 211 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gm5160F8VPN3 147 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gm3591K7N6X2 186 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Usp35M0QWN7 1009 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Birc5O70201 140 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mark3Q03141 753 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ccdc185Q3V118 621 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Zcwpw1Q6IR42 630 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Celf6Q7TN33 460 aaKnown RBP10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Olfr392Q7TRX6 312 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Dusp4Q8BFV3 398 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mboat7Q8CHK3 473 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Bag5Q8CI32 447 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Pcdhb1Q91Y08 818 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Kremen1Q99N43 473 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Pcyox1Q9CQF9 505 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ppp1r12aQ9DBR7 1029 aaKnown RBP10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Slc2a5Q9WV38 501 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Heg1E9Q7X6 1337 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Card9A2AIV8 536 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Arhgef26D3YYY8 869 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Usp17ldG5E8G2 545 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Usp17lcG5E8I7 545 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Barx2O08686 283 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Lpar1P61793 364 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Lilrb3P97484 841 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 SnphQ80U23 495 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Wnk4Q80UE6 1222 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Enoph1Q8BGB7 257 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gga3Q8BMI3 718 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Spats2lQ91WJ7 558 aaKnown RBP10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ing2Q9ESK4 281 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Nme3Q9WV85 169 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Znf609Q8BZ47 1413 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Rabgap1A2AWA9 1064 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Apol7bB1AQP7 369 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Dsg3O35902 993 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 ChrngP04760 519 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Igfbp4P47879 254 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Nr2c2P49117 596 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Stx3Q64704 289 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Alkbh8Q80Y20 664 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Hdac11Q91WA3 347 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Asah2Q9JHE3 756 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ngly1Q9JI78 651 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Lgr5Q9Z1P4 907 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Vmn2r63E9Q0K5 859 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gm9268E9Q0M3 861 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Vmn2r62K7N712 859 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Bnip3O55003 187 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 EpoP07321 192 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Trim43cP86449 446 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Foxred2Q3USW5 665 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Arhgap44Q5SSM3 814 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Tfe3Q64092 572 aaKnown RBP10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Nsun6Q7TS68 476 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 RbakQ8BQC8 711 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Cadm1Q8R5M8 456 aaKnown RBP10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 FtcdQ91XD4 541 aa10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Afg3l1Q920A7 789 aaKnown RBP10.79□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Akap1O08715 857 aaKnown RBP10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 ClgnP52194 611 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Sema5aQ62217 1077 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 FtoQ8BGW1 502 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Klhl2Q8JZP3 593 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Dnajc19Q9CQV7 116 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Olfr711Q9EPG2 314 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Neu2Q9JMH3 379 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ddx60E9PZQ1 1711 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Serpinb3cA2RSF9 386 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms