RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	CDC21	P06785	304 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	YOL162W	P0CF19	215 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	MAK32	P23060	363 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	SCO1	P23833	295 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	NFS1	P25374	497 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	NUD1	P32336	851 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	HOG1	P32485	435 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	INM1	P38710	295 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	YHL041W	P38730	149 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	RPB11	P38902	120 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	YIL089W	P40500	205 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	PAU4	P53427	120 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	DUG3	P53871	357 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	NRG1	Q03125	231 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	STP4	Q07351	490 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	ENB1	Q08299	606 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	RPL7B	Q12213	244 aa	Known RBP	4.23	□□□□□ -1.73
CLF1	YLR117C	DET1	Q99288	334 aa	Known RBP	4.23	□□□□□ -1.73
CLF1	YLR117C	PAU1	P0CE88	120 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	PAU14	P0CE89	120 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	PAU6	P0CE90	120 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	PAU18	P0CE91	120 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	PAU8	P0CE92	120 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	PAU11	P0CE93	120 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	MSN1	P22148	382 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	TAE1	P38340	232 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	PAU13	P38725	120 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	WSC4	P38739	605 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	DOG2	P38773	246 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	YHR130C	P38834	111 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	COQ5	P49017	307 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	YGL230C	P53074	147 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	ERG26	P53199	349 aa	Known RBP	4.22	□□□□□ -1.73
CLF1	YLR117C	YNR014W	P53719	212 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	BIO5	P53744	561 aa	Known RBP	4.22	□□□□□ -1.73
CLF1	YLR117C	PAU10	Q03050	120 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	IZH1	Q03419	316 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	TRI1	Q05024	226 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	PAU20	Q08322	120 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	PAU9	Q3E770	120 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	INO4	P13902	151 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	TRX3	P25372	127 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	YJU3	P28321	313 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
CLF1	YLR117C	YER121W	P40076	114 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	IST3	P40565	148 aa	Predicted RBP	4.22	□□□□□ -1.73
CLF1	YLR117C	XPT1	P47165	209 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	LST7	P53237	242 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	ATG4	P53867	494 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	PRM3	Q08931	133 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	SME1	Q12330	94 aa	Predicted RBP	4.22	□□□□□ -1.73
CLF1	YLR117C	YLR363W-A	Q3E747	85 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	ISD11	Q6Q560	94 aa		4.22	□□□□□ -1.73
CLF1	YLR117C	DPM1	P14020	267 aa	Known RBP	4.21	□□□□□ -1.74
CLF1	YLR117C	MRS4	P23500	304 aa		4.21	□□□□□ -1.74
CLF1	YLR117C	YCR100C	P25606	316 aa		4.21	□□□□□ -1.74
CLF1	YLR117C	IMG2	P25642	146 aa	Predicted RBP	4.21	□□□□□ -1.74
CLF1	YLR117C	FUN19	P28003	413 aa	Predicted RBP	4.21	□□□□□ -1.74
CLF1	YLR117C	IDH2	P28241	369 aa	Known RBP	4.21	□□□□□ -1.74
CLF1	YLR117C	MKK2	P32491	506 aa		4.21	□□□□□ -1.74
CLF1	YLR117C	YBR071W	P38243	211 aa		4.21	□□□□□ -1.74
CLF1	YLR117C	SDS24	P38314	527 aa		4.21	□□□□□ -1.74
CLF1	YLR117C	YHR127W	P38833	243 aa	Known RBP	4.21	□□□□□ -1.74
CLF1	YLR117C	BAT1	P38891	393 aa	Known RBP	4.21	□□□□□ -1.74
CLF1	YLR117C	YND1	P40009	630 aa		4.21	□□□□□ -1.74
CLF1	YLR117C	GPP2	P40106	250 aa	Known RBP	4.21	□□□□□ -1.74
CLF1	YLR117C	HAC1	P41546	238 aa		4.21	□□□□□ -1.74
CLF1	YLR117C	DAD3	P69850	94 aa		4.21	□□□□□ -1.74
CLF1	YLR117C	ECM18	Q04623	453 aa		4.21	□□□□□ -1.74
CLF1	YLR117C	PRP11	Q07350	266 aa	Predicted RBP	4.21	□□□□□ -1.74
CLF1	YLR117C	YOR378W	Q08902	515 aa		4.21	□□□□□ -1.74
CLF1	YLR117C	MCP1	Q12106	302 aa		4.21	□□□□□ -1.74
CLF1	YLR117C	YDL177C	Q12257	170 aa		4.21	□□□□□ -1.74
CLF1	YLR117C	HEM13	P11353	328 aa	Known RBP	4.2	□□□□□ -1.74
CLF1	YLR117C	URA5	P13298	226 aa	Known RBP	4.2	□□□□□ -1.74
CLF1	YLR117C	SEC11	P15367	167 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	YGL010W	P25338	174 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	ADK2	P26364	225 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	MSS51	P32335	436 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	DAD2	P36162	133 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	TEM1	P38987	245 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	UME6	P39001	836 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	YCH1	P42937	148 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	GIS1	Q03833	894 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	SDH7	Q04401	133 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	GRE1	Q08969	168 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	PFA4	Q12006	378 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	YPT1	P01123	206 aa	Known RBP	4.2	□□□□□ -1.74
CLF1	YLR117C	HYP2	P23301	157 aa	Known RBP	4.2	□□□□□ -1.74
CLF1	YLR117C	ZRT1	P32804	376 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	MAC1	P35192	417 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	YEL068C	P39977	110 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	MSL1	P40567	111 aa	Predicted RBP	4.2	□□□□□ -1.74
CLF1	YLR117C	SNO3	P43544	222 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	ERJ5	P43613	295 aa	Predicted RBP	4.2	□□□□□ -1.74
CLF1	YLR117C	SNO2	P53823	222 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	CSL4	P53859	292 aa	Predicted RBP	4.2	□□□□□ -1.74
CLF1	YLR117C	YMR082C	Q04276	118 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	COQ11	Q05892	277 aa		4.2	□□□□□ -1.74
CLF1	YLR117C	FCY22	Q12119	530 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms