RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ADPGKQ9BRR6 497 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 FAM213AQ9BRX8 229 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 MKNK1Q9BUB5 465 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 GRPEL1Q9HAV7 217 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 HCFC2Q9Y5Z7 792 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 ATG2AQ2TAZ0 1938 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 HIDE1A8MVS5 230 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 PRR5-ARHGAP8B1AHC4 643 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 OGTO15294 1046 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 FAM189A1O60320 539 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 LDHAP00338 332 aaKnown RBP10.18□□□□□ -0.78
PHGDH-228ENST00000641847 ADRB2P07550 413 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 CDK11BP21127 795 aaKnown RBP10.18□□□□□ -0.78
PHGDH-228ENST00000641847 PSMC2P35998 433 aaKnown RBP10.18□□□□□ -0.78
PHGDH-228ENST00000641847 MTIF2P46199 727 aaKnown RBP10.18□□□□□ -0.78
PHGDH-228ENST00000641847 GATMP50440 423 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 ARHGAP8P85298 464 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 HSP90AA2PQ14568 343 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-228ENST00000641847 KRT31Q15323 416 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 SNRNP35Q16560 246 aaKnown RBP10.18□□□□□ -0.78
PHGDH-228ENST00000641847 UVSSAQ2YD98 709 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 SEZ6Q53EL9 994 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 TCP11X2Q5H9J9 407 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 UBXN11Q5T124 520 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 RARS2Q5T160 578 aaKnown RBP10.18□□□□□ -0.78
PHGDH-228ENST00000641847 TWF2Q6IBS0 349 aaKnown RBP10.18□□□□□ -0.78
PHGDH-228ENST00000641847 KIAA1841Q6NSI8 718 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 SLC24A5Q71RS6 500 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 CEP120Q8N960 986 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 MRPL43Q8N983 215 aaKnown RBP10.18□□□□□ -0.78
PHGDH-228ENST00000641847 ANKRD20A12PQ8NF67 263 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 ZNF558Q96NG5 402 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 EIF2AQ9BY44 585 aaKnown RBP10.18□□□□□ -0.78
PHGDH-228ENST00000641847 TRIM6Q9C030 488 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-228ENST00000641847 TMX1Q9H3N1 280 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 KIAA1586Q9HCI6 787 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 CHST12Q9NRB3 414 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 TAB2Q9NYJ8 693 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 NCDNQ9UBB6 729 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 CDV3Q9UKY7 258 aaKnown RBP10.18□□□□□ -0.78
PHGDH-228ENST00000641847 DUSP12Q9UNI6 340 aa10.18□□□□□ -0.78
PHGDH-228ENST00000641847 ZNF233A6NK53 670 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 MAPK13O15264 365 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 SERPINC1P01008 464 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 KRT13P13646 458 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 PRKCSHP14314 528 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-228ENST00000641847 ZSCAN20P17040 1043 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-228ENST00000641847 NPR3P17342 541 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 TNFSF9P41273 254 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 ACOT2P49753 483 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 MARSP56192 900 aaKnown RBP10.17□□□□□ -0.78
PHGDH-228ENST00000641847 OSTNP61366 133 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 FANCCQ00597 558 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 LMNB2Q03252 620 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 CYP24A1Q07973 514 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 BFSP1Q12934 665 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 DCAF17Q5H9S7 520 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-228ENST00000641847 CRELD2Q6UXH1 353 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-228ENST00000641847 CCDC149Q6ZUS6 474 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 INTS8Q75QN2 995 aaKnown RBP10.17□□□□□ -0.78
PHGDH-228ENST00000641847 BRSK2Q8IWQ3 736 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 TRIM59Q8IWR1 403 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 RDH13Q8NBN7 331 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 ADAM2Q99965 735 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 METTL14Q9HCE5 456 aaKnown RBP10.17□□□□□ -0.78
PHGDH-228ENST00000641847 RGS18Q9NS28 235 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 RBAKQ9NYW8 714 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-228ENST00000641847 SPG21Q9NZD8 308 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 IGSF9Q9P2J2 1179 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 WNT16Q9UBV4 365 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 ARMCX3Q9UH62 379 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-228ENST00000641847 LIMA1Q9UHB6 759 aaKnown RBP10.17□□□□□ -0.78
PHGDH-228ENST00000641847 OTOGLQ3ZCN5 2332 aa10.17□□□□□ -0.78
PHGDH-228ENST00000641847 C2orf71A6NGG8 1288 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 TULP1O00294 542 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-228ENST00000641847 MGEA5O60502 916 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 TPM2P07951 284 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 WEE2P0C1S8 567 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 CXCL8P10145 99 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 GRM5P41594 1212 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 COPB1P53618 953 aaKnown RBP10.16□□□□□ -0.78
PHGDH-228ENST00000641847 DSC3Q14574 896 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 ENOX2Q16206 610 aaKnown RBP10.16□□□□□ -0.78
PHGDH-228ENST00000641847 MAN2A1Q16706 1144 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 KYAT1Q16773 422 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 TCERG1LQ5VWI1 586 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 SARM1Q6SZW1 724 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 KCNT2Q6UVM3 1135 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 APTXQ7Z2E3 356 aaKnown RBP10.16□□□□□ -0.78
PHGDH-228ENST00000641847 C1orf210Q8IVY1 113 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 LRRC43Q8N309 656 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 DCLK2Q8N568 766 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 RIN2Q8WYP3 895 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-228ENST00000641847 CCDC94Q9BW85 323 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-228ENST00000641847 APOL6Q9BWW8 343 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 TMEM117Q9H0C3 514 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 NXF3Q9H4D5 531 aaKnown RBP10.16□□□□□ -0.78
PHGDH-228ENST00000641847 FAM105AQ9NUU6 356 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 TMEM161AQ9NX61 479 aa10.16□□□□□ -0.78
PHGDH-228ENST00000641847 CDH22Q9UJ99 828 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms