RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 PRIMPOLQ96LW4 560 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 FAM20AQ96MK3 541 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 NFKBIZQ9BYH8 718 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 ATXN3LQ9H3M9 355 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 THG1LQ9NWX6 298 aaKnown RBP8.63□□□□□ -1.03
PHGDH-217ENST00000641455 AFF4Q9UHB7 1163 aaKnown RBP8.63□□□□□ -1.03
PHGDH-217ENST00000641455 PCDHA4Q9UN74 947 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 USP20Q9Y2K6 914 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 YIPF1Q9Y548 306 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 TRIP11Q15643 1979 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 PCNX2A6NKB5 2137 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 TTLL13PA6NNM8 815 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 H0Y626 953 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 PODXLO00592 558 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 SYN3O14994 580 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 TRIM16O95361 564 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 EGFP01133 1207 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 EPHB3P54753 998 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 SCAPQ12770 1279 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 LMAN2Q12907 356 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 PSMD2Q13200 908 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 PLD1Q13393 1074 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 ARHGAP15Q53QZ3 475 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 TRIM61Q5EBN2 209 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 TMEM196Q5HYL7 178 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 GPR158Q5T848 1215 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 PMS2CLQ68D20 193 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 CD300LGQ6UXG3 332 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 PPP4R3CPQ6ZMV5 832 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 C11orf74Q86VG3 221 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 TTC30AQ86WT1 665 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 BLIDQ8IZY5 108 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 RPLP0P6Q8NHW5 317 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 LRIG1Q96JA1 1093 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 LRRC3BQ96PB8 259 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 PGLYRP2Q96PD5 576 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 BBC3Q96PG8 261 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-217ENST00000641455 PPP1R10Q96QC0 940 aaKnown RBP8.62□□□□□ -1.03
PHGDH-217ENST00000641455 NUSAP1Q9BXS6 441 aaKnown RBP8.62□□□□□ -1.03
PHGDH-217ENST00000641455 RNF26Q9BY78 433 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-217ENST00000641455 TPSD1Q9BZJ3 242 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 TPCN1Q9ULQ1 816 aa8.62□□□□□ -1.03
PHGDH-217ENST00000641455 CIZ1Q9ULV3 898 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-217ENST00000641455 NUP210Q8TEM1 1887 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-217ENST00000641455 MEFVO15553 781 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-217ENST00000641455 PRAMEF12O95522 483 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 U2AF2P26368 475 aaKnown RBP eCLIP8.61□□□□□ -1.034e-10■■□□□ 11.5
PHGDH-217ENST00000641455 GABRR2P28476 465 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 MCM4P33991 863 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 ALDH1A3P47895 512 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 MCM2P49736 904 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 ATXN3P54252 364 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-217ENST00000641455 YARSP54577 528 aaKnown RBP8.61□□□□□ -1.03
PHGDH-217ENST00000641455 AMPD2Q01433 879 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 CACNB1Q02641 598 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-217ENST00000641455 DMC1Q14565 340 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 MAPK6Q16659 721 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 ADCK5Q3MIX3 580 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 DCAF4L1Q3SXM0 396 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 USP39Q53GS9 565 aaKnown RBP8.61□□□□□ -1.03
PHGDH-217ENST00000641455 EEF1DP3Q658K8 133 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 DIEXFQ68CQ4 756 aaKnown RBP8.61□□□□□ -1.03
PHGDH-217ENST00000641455 RNF19BQ6ZMZ0 732 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 ARMCX6Q7L4S7 300 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 KRT25Q7Z3Z0 450 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 TRIM22Q8IYM9 498 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 HDDC3Q8N4P3 179 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 TSTD1Q8NFU3 115 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 DEPTORQ8TB45 409 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 ADAM32Q8TC27 787 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 BRF1Q92994 677 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 ACDQ96AP0 544 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 GCNAQ96QF7 691 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 ESYT1Q9BSJ8 1104 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 C2orf40Q9H1Z8 148 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 CCDC86Q9H6F5 360 aaKnown RBP8.61□□□□□ -1.03
PHGDH-217ENST00000641455 KCNMB3Q9NPA1 279 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 GPRC5CQ9NQ84 441 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 SH3GLB2Q9NR46 395 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 GKN1Q9NS71 199 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 OBP2AQ9NY56 170 aa8.61□□□□□ -1.03
PHGDH-217ENST00000641455 NBEAQ8NFP9 2946 aa8.6□□□□□ -1.03
PHGDH-217ENST00000641455 A0A087WWV3 80 aa8.6□□□□□ -1.03
PHGDH-217ENST00000641455 SMIM28A0A1B0GU29 152 aa8.6□□□□□ -1.03
PHGDH-217ENST00000641455 CCDC194A0A1B0GVG4 234 aa8.6□□□□□ -1.03
PHGDH-217ENST00000641455 CCNT1O60563 726 aaKnown RBP8.6□□□□□ -1.03
PHGDH-217ENST00000641455 ENGP17813 658 aa8.6□□□□□ -1.03
PHGDH-217ENST00000641455 BCKDHBP21953 392 aa8.6□□□□□ -1.03
PHGDH-217ENST00000641455 MARCKSP29966 332 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-217ENST00000641455 OSTNP61366 133 aa8.6□□□□□ -1.03
PHGDH-217ENST00000641455 CYP4F8P98187 520 aa8.6□□□□□ -1.03
PHGDH-217ENST00000641455 SOX4Q06945 474 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-217ENST00000641455 C19orf57Q0VDD7 668 aa8.6□□□□□ -1.03
PHGDH-217ENST00000641455 RUNX3Q13761 415 aa8.6□□□□□ -1.03
PHGDH-217ENST00000641455 FAM187BQ17R55 369 aa8.6□□□□□ -1.03
PHGDH-217ENST00000641455 ZNF423Q2M1K9 1284 aa8.6□□□□□ -1.03
PHGDH-217ENST00000641455 Q6ZUG5 572 aa8.6□□□□□ -1.03
PHGDH-217ENST00000641455 APBB1IPQ7Z5R6 666 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-217ENST00000641455 TMC8Q8IU68 726 aa8.6□□□□□ -1.03
PHGDH-217ENST00000641455 GLIS3Q8NEA6 775 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms