RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 RSPH1Q8WYR4 309 aa21.27■■□□□ 1
PHGDH-210ENST00000641115 FOXN3O00409 490 aaPredicted RBP21.26■□□□□ 0.99
PHGDH-210ENST00000641115 PPEF2O14830 753 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 GFPT2O94808 682 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 PNMA6AP0CW24 399 aaPredicted RBP21.26■□□□□ 0.99
PHGDH-210ENST00000641115 ASPAP45381 313 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 YWHAEP62258 255 aaKnown RBP21.26■□□□□ 0.99
PHGDH-210ENST00000641115 CDK17Q00537 523 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 FPGSQ05932 587 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 TDRD12Q587J7 1177 aaKnown RBP21.26■□□□□ 0.99
PHGDH-210ENST00000641115 WDR59Q6PJI9 974 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 SCARA5Q6ZMJ2 495 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 CCDC85CA6NKD9 419 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 ARHGAP6O43182 974 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 BAIAP3O94812 1187 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 AMHP03971 560 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 SERPING1P05155 500 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 RPL9P32969 192 aaKnown RBP21.26■□□□□ 0.99
PHGDH-210ENST00000641115 TAF6P49848 677 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 KLHL30Q0D2K2 578 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 SV2CQ496J9 727 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.26■□□□□ 0.99
PHGDH-210ENST00000641115 GPIHBP1Q8IV16 184 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 UROC1Q96N76 676 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 POLIQ9UNA4 740 aa21.26■□□□□ 0.99
PHGDH-210ENST00000641115 MKI67P46013 3256 aaKnown RBP21.25■□□□□ 0.99
PHGDH-210ENST00000641115 FNDC1Q4ZHG4 1894 aaPredicted RBP21.25■□□□□ 0.99
PHGDH-210ENST00000641115 CASTOR2A6NHX0 329 aa21.25■□□□□ 0.99
PHGDH-210ENST00000641115 PODXLO00592 558 aa21.25■□□□□ 0.99
PHGDH-210ENST00000641115 ACRP10323 421 aa21.25■□□□□ 0.99
PHGDH-210ENST00000641115 KRT5P13647 590 aa21.25■□□□□ 0.99
PHGDH-210ENST00000641115 CLCNKBP51801 687 aa21.25■□□□□ 0.99
PHGDH-210ENST00000641115 RNASELQ05823 741 aaKnown RBP21.25■□□□□ 0.99
PHGDH-210ENST00000641115 FAM71AQ8IYT1 594 aa21.25■□□□□ 0.99
PHGDH-210ENST00000641115 CRIPAKQ8N1N5 446 aa21.25■□□□□ 0.99
PHGDH-210ENST00000641115 BADQ92934 168 aa21.25■□□□□ 0.99
PHGDH-210ENST00000641115 DDX27Q96GQ7 796 aaKnown RBP21.25■□□□□ 0.99
PHGDH-210ENST00000641115 FAM193BQ96PV7 902 aaPredicted RBP21.25■□□□□ 0.99
PHGDH-210ENST00000641115 BCO2Q9BYV7 579 aa21.25■□□□□ 0.99
PHGDH-210ENST00000641115 BZW2Q9Y6E2 419 aaKnown RBP21.25■□□□□ 0.99
PHGDH-210ENST00000641115 SOWAHDA6NJG2 315 aa21.24■□□□□ 0.99
PHGDH-210ENST00000641115 MMS19Q96T76 1030 aa21.24■□□□□ 0.99
PHGDH-210ENST00000641115 CHP1Q99653 195 aa21.24■□□□□ 0.99
PHGDH-210ENST00000641115 MRPL9Q9BYD2 267 aaKnown RBP21.24■□□□□ 0.99
PHGDH-210ENST00000641115 CYP3A43Q9HB55 503 aa21.24■□□□□ 0.99
PHGDH-210ENST00000641115 TBC1D13Q9NVG8 400 aa21.24■□□□□ 0.99
PHGDH-210ENST00000641115 SNX9Q9Y5X1 595 aa21.24■□□□□ 0.99
PHGDH-210ENST00000641115 KPNA7A9QM74 516 aa21.23■□□□□ 0.99
PHGDH-210ENST00000641115 CD58P19256 250 aa21.23■□□□□ 0.99
PHGDH-210ENST00000641115 PRKCIP41743 596 aa21.23■□□□□ 0.99
PHGDH-210ENST00000641115 UPP1Q16831 310 aa21.23■□□□□ 0.99
PHGDH-210ENST00000641115 HGSNATQ68CP4 663 aa21.23■□□□□ 0.99
PHGDH-210ENST00000641115 SMYD5Q6GMV2 418 aa21.23■□□□□ 0.99
PHGDH-210ENST00000641115 IRF2BP2Q7Z5L9 587 aa21.23■□□□□ 0.99
PHGDH-210ENST00000641115 DEF6Q9H4E7 631 aa21.23■□□□□ 0.99
PHGDH-210ENST00000641115 CISHQ9NSE2 258 aa21.23■□□□□ 0.99
PHGDH-210ENST00000641115 ARHGAP20Q9P2F6 1191 aa21.23■□□□□ 0.99
PHGDH-210ENST00000641115 PCDHB4Q9Y5E5 795 aa21.23■□□□□ 0.99
PHGDH-210ENST00000641115 UPP2O95045 317 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 WEE2P0C1S8 567 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 ACO1P21399 889 aaKnown RBP21.22■□□□□ 0.99
PHGDH-210ENST00000641115 KCNJ6P48051 423 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 LILRA4P59901 499 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 WDR5P61964 334 aaKnown RBP21.22■□□□□ 0.99
PHGDH-210ENST00000641115 TMEM270Q6UE05 265 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 TTC39CQ8N584 583 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 CCDC42Q96M95 316 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 CASD1Q96PB1 797 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 FAM124BQ9H5Z6 455 aaPredicted RBP21.22■□□□□ 0.99
PHGDH-210ENST00000641115 HAUS4Q9H6D7 363 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 SMYD3Q9H7B4 428 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 NHEJ1Q9H9Q4 299 aaPredicted RBP21.22■□□□□ 0.99
PHGDH-210ENST00000641115 CACNG4Q9UBN1 327 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 ZKSCAN5Q9Y2L8 839 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 SSU72P8A0A1W2PR75 194 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 TBKBP1A7MCY6 615 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 PLEKP08567 350 aaPredicted RBP21.22■□□□□ 0.99
PHGDH-210ENST00000641115 SYN1P17600 705 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 DSC1Q08554 894 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 CCDC170Q8IYT3 715 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 UBR7Q8N806 425 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 DPF3Q92784 378 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 GDAP2Q9NXN4 497 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 PCDH10Q9P2E7 1040 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 CNTN6Q9UQ52 1028 aa21.22■□□□□ 0.99
PHGDH-210ENST00000641115 CYP26A1O43174 497 aa21.21■□□□□ 0.99
PHGDH-210ENST00000641115 FGBP02675 491 aa21.21■□□□□ 0.99
PHGDH-210ENST00000641115 PAX3P23760 479 aa21.21■□□□□ 0.99
PHGDH-210ENST00000641115 CYLC1P35663 651 aaPredicted RBP21.21■□□□□ 0.99
PHGDH-210ENST00000641115 RAP1GAPP47736 663 aa21.21■□□□□ 0.99
PHGDH-210ENST00000641115 GATMP50440 423 aa21.21■□□□□ 0.99
PHGDH-210ENST00000641115 MAPK8IP2Q13387 824 aaPredicted RBP21.21■□□□□ 0.99
PHGDH-210ENST00000641115 PSRC1Q6PGN9 363 aaPredicted RBP21.21■□□□□ 0.99
PHGDH-210ENST00000641115 OTOP2Q7RTS6 562 aa21.21■□□□□ 0.99
PHGDH-210ENST00000641115 VPS36Q86VN1 386 aa21.21■□□□□ 0.99
PHGDH-210ENST00000641115 ZNF280BQ86YH2 543 aa21.21■□□□□ 0.99
PHGDH-210ENST00000641115 LRRC43Q8N309 656 aa21.21■□□□□ 0.99
PHGDH-210ENST00000641115 RBBP8NLQ8NC74 664 aaPredicted RBP21.21■□□□□ 0.99
PHGDH-210ENST00000641115 TOP1MTQ969P6 601 aa21.21■□□□□ 0.99
PHGDH-210ENST00000641115 SPTLC1O15269 473 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms