RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 MICAL2O94851 1124 aa15.05■□□□□ -0
HLA-C-210ENST00000640219 TOP3BO95985 862 aaKnown RBP15.05■□□□□ -0
HLA-C-210ENST00000640219 MPLP40238 635 aa15.05■□□□□ -0
HLA-C-210ENST00000640219 VIPR2P41587 438 aa15.05■□□□□ -0
HLA-C-210ENST00000640219 KPNA1P52294 538 aaPredicted RBP15.05■□□□□ -0
HLA-C-210ENST00000640219 AMHR2Q16671 573 aa15.05■□□□□ -0
HLA-C-210ENST00000640219 DGKKQ5KSL6 1271 aa15.05■□□□□ -0
HLA-C-210ENST00000640219 LARP1BQ659C4 914 aaKnown RBP15.05■□□□□ -0
HLA-C-210ENST00000640219 SLC27A1Q6PCB7 646 aa15.05■□□□□ -0
HLA-C-210ENST00000640219 C1orf228Q6PIY5 440 aa15.05■□□□□ -0
HLA-C-210ENST00000640219 CDR2LQ86X02 465 aaPredicted RBP15.05■□□□□ -0
HLA-C-210ENST00000640219 CATSPER3Q86XQ3 398 aa15.05■□□□□ -0
HLA-C-210ENST00000640219 ZSWIM3Q96MP5 696 aa15.05■□□□□ -0
HLA-C-210ENST00000640219 SCNM1Q9BWG6 230 aa15.05■□□□□ -0
HLA-C-210ENST00000640219 ZSWIM4Q9H7M6 989 aa15.05■□□□□ -0
HLA-C-210ENST00000640219 NOL7Q9UMY1 257 aaKnown RBP15.05■□□□□ -0
HLA-C-210ENST00000640219 SDK1Q7Z5N4 2213 aa15.05■□□□□ -0
HLA-C-210ENST00000640219 ARHGEF37A1IGU5 675 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 VPS37CA5D8V6 355 aaPredicted RBP15.04■□□□□ -0
HLA-C-210ENST00000640219 TAF4O00268 1085 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 PRRG1O14668 218 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 USO1O60763 962 aaKnown RBP15.04■□□□□ -0
HLA-C-210ENST00000640219 CCDC192P0DO97 292 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 FGFR3P22607 806 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 MSNP26038 577 aaKnown RBP15.04■□□□□ -0
HLA-C-210ENST00000640219 ELF1P32519 619 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 CCR2P41597 374 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 MBTD1Q05BQ5 628 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 TFDP1Q14186 410 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 MXD4Q14582 209 aaPredicted RBP15.04■□□□□ -0
HLA-C-210ENST00000640219 WDR44Q5JSH3 913 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 FAM173BQ6P4H8 233 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 PDZD4Q76G19 769 aaPredicted RBP15.04■□□□□ -0
HLA-C-210ENST00000640219 IFNLR1Q8IU57 520 aaPredicted RBP15.04■□□□□ -0
HLA-C-210ENST00000640219 MFSD6LQ8IWD5 586 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 ASAP3Q8TDY4 903 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 EDEM2Q9BV94 578 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 RBSNQ9H1K0 784 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 C8orf33Q9H7E9 229 aaPredicted RBP15.04■□□□□ -0
HLA-C-210ENST00000640219 GPRC5CQ9NQ84 441 aa15.04■□□□□ -0
HLA-C-210ENST00000640219 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.04■□□□□ -0
HLA-C-210ENST00000640219 SYCE3A1L190 88 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 SLC38A8A6NNN8 435 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 C4orf47A7E2U8 309 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 ARNTLO00327 626 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 B4GALT5O43286 388 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 F13A1P00488 732 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 THP07101 528 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 SOX9P48436 509 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 PXNP49023 591 aaPredicted RBP15.03■□□□□ -0
HLA-C-210ENST00000640219 RARRES1P49788 294 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 CYP4A22Q5TCH4 519 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 SH3PXD2AQ5TCZ1 1133 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 DAB2IPQ5VWQ8 1189 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 TCEAL6Q6IPX3 200 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 YAF2Q8IY57 180 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 TCEAL3Q969E4 200 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 MTRQ99707 1265 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 TMEM63CQ9P1W3 806 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 BACE2Q9Y5Z0 518 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 NBEAQ8NFP9 2946 aa15.03■□□□□ -0
HLA-C-210ENST00000640219 DSPP15924 2871 aaKnown RBP15.03■□□□□ -0
HLA-C-210ENST00000640219 HEPACAM2A8MVW5 462 aa15.02■□□□□ -0
HLA-C-210ENST00000640219 PTGESO14684 152 aa15.02■□□□□ -0
HLA-C-210ENST00000640219 SYT1P21579 422 aa15.02■□□□□ -0
HLA-C-210ENST00000640219 UBE2HP62256 183 aa15.02■□□□□ -0
HLA-C-210ENST00000640219 POU5F1BQ06416 359 aa15.02■□□□□ -0
HLA-C-210ENST00000640219 CCDC183Q5T5S1 534 aa15.02■□□□□ -0
HLA-C-210ENST00000640219 TXNDC11Q6PKC3 985 aa15.02■□□□□ -0
HLA-C-210ENST00000640219 ANKS3Q6ZW76 656 aa15.02■□□□□ -0
HLA-C-210ENST00000640219 OTUD6AQ7L8S5 288 aa15.02■□□□□ -0
HLA-C-210ENST00000640219 ZSCAN30Q86W11 494 aa15.02■□□□□ -0
HLA-C-210ENST00000640219 ZNF461Q8TAF7 563 aa15.02■□□□□ -0
HLA-C-210ENST00000640219 ZSCAN18Q8TBC5 510 aaPredicted RBP15.02■□□□□ -0
HLA-C-210ENST00000640219 FAM200AQ8TCP9 573 aa15.02■□□□□ -0
HLA-C-210ENST00000640219 KIF12Q96FN5 646 aa15.02■□□□□ -0
HLA-C-210ENST00000640219 PLIN2Q99541 437 aa15.02■□□□□ -0
HLA-C-210ENST00000640219 TRPV4Q9HBA0 871 aa15.02■□□□□ -0
HLA-C-210ENST00000640219 VWA8A3KMH1 1905 aa15.02□□□□□ -0.01
HLA-C-210ENST00000640219 NCANO14594 1321 aa15.01□□□□□ -0.01
HLA-C-210ENST00000640219 AKAP13Q12802 2813 aa15.01□□□□□ -0.01
HLA-C-210ENST00000640219 CCDC163A0A0D9SF12 145 aa15.01□□□□□ -0.01
HLA-C-210ENST00000640219 A0A1B0GUA9 196 aa15.01□□□□□ -0.01
HLA-C-210ENST00000640219 MYBPHLA2RUH7 354 aa15.01□□□□□ -0.01
HLA-C-210ENST00000640219 SPECC1L-ADORA2AF8WAN1 911 aa15.01□□□□□ -0.01
HLA-C-210ENST00000640219 EXTL3O43909 919 aa15.01□□□□□ -0.01
HLA-C-210ENST00000640219 TKTP29401 623 aaKnown RBP15.01□□□□□ -0.01
HLA-C-210ENST00000640219 CCT6AP40227 531 aaKnown RBP15.01□□□□□ -0.01
HLA-C-210ENST00000640219 TRAPPC10P48553 1259 aa15.01□□□□□ -0.01
HLA-C-210ENST00000640219 GRIN1Q05586 938 aa15.01□□□□□ -0.01
HLA-C-210ENST00000640219 CAPSQ13938 189 aa15.01□□□□□ -0.01
HLA-C-210ENST00000640219 ZRSR1Q15695 479 aaKnown RBP15.01□□□□□ -0.01
HLA-C-210ENST00000640219 KCNK18Q7Z418 384 aa15.01□□□□□ -0.01
HLA-C-210ENST00000640219 SYNPOQ8N3V7 929 aa15.01□□□□□ -0.01
HLA-C-210ENST00000640219 ZC3H10Q96K80 434 aaKnown RBP15.01□□□□□ -0.01
HLA-C-210ENST00000640219 CCDC43Q96MW1 224 aaKnown RBP15.01□□□□□ -0.01
HLA-C-210ENST00000640219 POLR3FQ9H1D9 316 aaPredicted RBP15.01□□□□□ -0.01
HLA-C-210ENST00000640219 CCDC39Q9UFE4 941 aa15.01□□□□□ -0.01
HLA-C-210ENST00000640219 KIF3AQ9Y496 699 aa15.01□□□□□ -0.01
HLA-C-210ENST00000640219 LAMA1P25391 3075 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms