RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 PCDHB2Q9Y5E7 798 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 A6NJR5 290 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 OSTNP61366 133 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 TMEM132AQ24JP5 1023 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 ZNF568Q3ZCX4 644 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 MPZL3Q6UWV2 235 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 ZNF677Q86XU0 584 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 BRSK2Q8IWQ3 736 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 THNSL1Q8IYQ7 743 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 FAM212AQ96EL1 285 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 ANK1P16157 1881 aa16.11■□□□□ 0.17
TRIM3-215ENST00000639856 KIF3CO14782 793 aa16.11■□□□□ 0.17
TRIM3-215ENST00000639856 OGTO15294 1046 aa16.11■□□□□ 0.17
TRIM3-215ENST00000639856 SHOX2O60902 331 aaPredicted RBP16.11■□□□□ 0.17
TRIM3-215ENST00000639856 UNGP13051 313 aaPredicted RBP16.11■□□□□ 0.17
TRIM3-215ENST00000639856 CTNNA1P35221 906 aaKnown RBP16.11■□□□□ 0.17
TRIM3-215ENST00000639856 PHKA2P46019 1235 aa16.11■□□□□ 0.17
TRIM3-215ENST00000639856 BPIFB4P59827 614 aa16.11■□□□□ 0.17
TRIM3-215ENST00000639856 DR1Q01658 176 aa16.11■□□□□ 0.17
TRIM3-215ENST00000639856 DHX34Q14147 1143 aaKnown RBP16.11■□□□□ 0.17
TRIM3-215ENST00000639856 CYP4F22Q6NT55 531 aa16.11■□□□□ 0.17
TRIM3-215ENST00000639856 AADACL2Q6P093 401 aa16.11■□□□□ 0.17
TRIM3-215ENST00000639856 KAT2BQ92831 832 aa16.11■□□□□ 0.17
TRIM3-215ENST00000639856 BTBD6Q96KE9 485 aa16.11■□□□□ 0.17
TRIM3-215ENST00000639856 CNOT8Q9UFF9 292 aaKnown RBP16.11■□□□□ 0.17
TRIM3-215ENST00000639856 PCDHA3Q9Y5H8 950 aa16.11■□□□□ 0.17
TRIM3-215ENST00000639856 SPOPO43791 374 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 CTNNA2P26232 953 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 HSD17B3P37058 310 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 BEX3Q00994 111 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 AMHR2Q16671 573 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 SEL1L2Q5TEA6 688 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 TMEM192Q8IY95 271 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 SOCS4Q8WXH5 440 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 TRIM51Q9BSJ1 452 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 NFKBIZQ9BYH8 718 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRIM3-215ENST00000639856 CPSF3Q9UKF6 684 aaKnown RBP16.1■□□□□ 0.17
TRIM3-215ENST00000639856 PLAAQ9Y263 795 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 FAM187AA6NFU0 413 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 PHF2O75151 1096 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 F2P00734 622 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 CALCAP01258 141 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 IGHA2P01877 340 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 TMOD1P28289 359 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 TM4SF4P48230 202 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 KIAA0319LQ8IZA0 1049 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 C1orf131Q8NDD1 294 aaKnown RBP16.1■□□□□ 0.17
TRIM3-215ENST00000639856 NLRP7Q8WX94 980 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 CPB2Q96IY4 423 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 ERP44Q9BS26 406 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 CDT1Q9H211 546 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 DPH5Q9H2P9 285 aa16.1■□□□□ 0.17
TRIM3-215ENST00000639856 APOBEC3GQ9HC16 384 aaKnown RBP16.1■□□□□ 0.17
TRIM3-215ENST00000639856 TRIP12Q14669 1992 aaPredicted RBP16.09■□□□□ 0.17
TRIM3-215ENST00000639856 CA12O43570 354 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 SMIM10L2AP0DMW4 78 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 SMIM10L2BP0DMW5 78 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 PYGMP11217 842 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 CHRNA3P32297 505 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 TMEM62Q0P6H9 643 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 HIC1Q14526 733 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 DUPD1Q68J44 220 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 LRIG3Q6UXM1 1119 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 LRRC31Q6UY01 552 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 MCOLN2Q8IZK6 566 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 PRELID2Q8N945 189 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 SCLT1Q96NL6 688 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 MTMR12Q9C0I1 747 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 AVENQ9NQS1 362 aaPredicted RBP16.09■□□□□ 0.17
TRIM3-215ENST00000639856 PRMT7Q9NVM4 692 aaPredicted RBP16.09■□□□□ 0.17
TRIM3-215ENST00000639856 TNFSF13BQ9Y275 285 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 UMODL1Q5DID0 1318 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 TMEM88BA6NKF7 163 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 GPR25O00155 361 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 IVLP07476 585 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 ACO1P21399 889 aaKnown RBP16.09■□□□□ 0.17
TRIM3-215ENST00000639856 FLT3P36888 993 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 POU5F1BQ06416 359 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 CUL2Q13617 745 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 UAP1Q16222 522 aaPredicted RBP16.09■□□□□ 0.17
TRIM3-215ENST00000639856 KCTD19Q17RG1 926 aaPredicted RBP16.09■□□□□ 0.17
TRIM3-215ENST00000639856 CPNE8Q86YQ8 564 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 SMC1BQ8NDV3 1235 aa16.09■□□□□ 0.17
TRIM3-215ENST00000639856 FAM49AQ9H0Q0 323 aaPredicted RBP16.09■□□□□ 0.17
TRIM3-215ENST00000639856 CYP1A1P04798 512 aaPredicted RBP16.08■□□□□ 0.16
TRIM3-215ENST00000639856 MYBL1P10243 752 aa16.08■□□□□ 0.16
TRIM3-215ENST00000639856 FGFR4P22455 802 aa16.08■□□□□ 0.16
TRIM3-215ENST00000639856 RWDD2BP57060 319 aa16.08■□□□□ 0.16
TRIM3-215ENST00000639856 IRF5Q13568 498 aa16.08■□□□□ 0.16
TRIM3-215ENST00000639856 MTMR3Q13615 1198 aa16.08■□□□□ 0.16
TRIM3-215ENST00000639856 KIZQ2M2Z5 673 aa16.08■□□□□ 0.16
TRIM3-215ENST00000639856 TMC3Q7Z5M5 1100 aa16.08■□□□□ 0.16
TRIM3-215ENST00000639856 JAMLQ86YT9 394 aa16.08■□□□□ 0.16
TRIM3-215ENST00000639856 IFNLR1Q8IU57 520 aaPredicted RBP16.08■□□□□ 0.16
TRIM3-215ENST00000639856 TRPV1Q8NER1 839 aa16.08■□□□□ 0.16
TRIM3-215ENST00000639856 TRIM11Q96F44 468 aa16.08■□□□□ 0.16
TRIM3-215ENST00000639856 PDZD7Q9H5P4 517 aa16.08■□□□□ 0.16
TRIM3-215ENST00000639856 CWC15Q9P013 229 aaKnown RBP16.08■□□□□ 0.16
TRIM3-215ENST00000639856 PCYOX1Q9UHG3 505 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms