RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 NOMO2Q5JPE7 1267 aa1.56□□□□□ -2.16
LMBR1-222ENST00000638959 COLCA1Q6ZS62 124 aa1.56□□□□□ -2.16
LMBR1-222ENST00000638959 CLNKQ7Z7G1 428 aa1.56□□□□□ -2.16
LMBR1-222ENST00000638959 CELF2-AS1Q8N7Q2 184 aa1.56□□□□□ -2.16
LMBR1-222ENST00000638959 Q8NA96 180 aa1.56□□□□□ -2.16
LMBR1-222ENST00000638959 ST13P5Q8NFI4 369 aaPredicted RBP1.56□□□□□ -2.16
LMBR1-222ENST00000638959 TBC1D5Q92609 795 aa1.56□□□□□ -2.16
LMBR1-222ENST00000638959 MAGEB10Q96LZ2 347 aaPredicted RBP1.56□□□□□ -2.16
LMBR1-222ENST00000638959 MMS19Q96T76 1030 aa1.56□□□□□ -2.16
LMBR1-222ENST00000638959 MLXIPQ9HAP2 919 aa1.56□□□□□ -2.16
LMBR1-222ENST00000638959 DNMT3BQ9UBC3 853 aaKnown RBP1.56□□□□□ -2.16
LMBR1-222ENST00000638959 NOC2LQ9Y3T9 749 aaKnown RBP1.56□□□□□ -2.16
LMBR1-222ENST00000638959 ELL2O00472 640 aaPredicted RBP1.55□□□□□ -2.16
LMBR1-222ENST00000638959 ACOT8O14734 319 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 ZNF213O14771 459 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 RHOP08100 348 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 FGF3P11487 239 aaPredicted RBP1.55□□□□□ -2.16
LMBR1-222ENST00000638959 ATF4P18848 351 aaPredicted RBP1.55□□□□□ -2.16
LMBR1-222ENST00000638959 ATP5JP18859 108 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 SLC9A1P19634 815 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 NOVP48745 357 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 RRP1P56182 461 aaKnown RBP1.55□□□□□ -2.16
LMBR1-222ENST00000638959 RASA3Q14644 834 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 PITRM1Q5JRX3 1037 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 AFMIDQ63HM1 303 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 ABHD17CQ6PCB6 329 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 ZNF572Q7Z3I7 529 aaPredicted RBP1.55□□□□□ -2.16
LMBR1-222ENST00000638959 ZNF804AQ7Z570 1209 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 ZNF548Q8NEK5 533 aaPredicted RBP1.55□□□□□ -2.16
LMBR1-222ENST00000638959 B4GALNT2Q8NHY0 566 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 NUP133Q8WUM0 1156 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 RFKQ969G6 155 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 SPATA9Q9BWV2 254 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 MRPL44Q9H9J2 332 aaKnown RBP1.55□□□□□ -2.16
LMBR1-222ENST00000638959 FBXO34Q9NWN3 711 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 INPP5FQ9Y2H2 1132 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 TP53BP1Q12888 1972 aaPredicted RBP1.55□□□□□ -2.16
LMBR1-222ENST00000638959 ADGRA2Q96PE1 1338 aa1.55□□□□□ -2.16
LMBR1-222ENST00000638959 LOC101059915A0A1B0GWI6 518 aaPredicted RBP1.54□□□□□ -2.16
LMBR1-222ENST00000638959 A0A1W2PNU3 283 aaPredicted RBP1.54□□□□□ -2.16
LMBR1-222ENST00000638959 FCHO1O14526 889 aa1.54□□□□□ -2.16
LMBR1-222ENST00000638959 PFKMP08237 780 aa1.54□□□□□ -2.16
LMBR1-222ENST00000638959 FAM163BP0C2L3 166 aa1.54□□□□□ -2.16
LMBR1-222ENST00000638959 CYP19A1P11511 503 aaPredicted RBP1.54□□□□□ -2.16
LMBR1-222ENST00000638959 ALOX15P16050 662 aaPredicted RBP1.54□□□□□ -2.16
LMBR1-222ENST00000638959 ZFXP17010 805 aaPredicted RBP1.54□□□□□ -2.16
LMBR1-222ENST00000638959 HOXC13P31276 330 aa1.54□□□□□ -2.16
LMBR1-222ENST00000638959 HNRNPMP52272 730 aaKnown RBP eCLIP1.54□□□□□ -2.16
LMBR1-222ENST00000638959 GAS1P54826 345 aa1.54□□□□□ -2.16
LMBR1-222ENST00000638959 ZNF268Q14587 947 aaPredicted RBP1.54□□□□□ -2.16
LMBR1-222ENST00000638959 NFATC4Q14934 902 aa1.54□□□□□ -2.16
LMBR1-222ENST00000638959 ZBTB41Q5SVQ8 909 aa1.54□□□□□ -2.16
LMBR1-222ENST00000638959 ZNF529Q6P280 563 aa1.54□□□□□ -2.16
LMBR1-222ENST00000638959 ESPNLQ6ZVH7 1005 aa1.54□□□□□ -2.16
LMBR1-222ENST00000638959 ZNF551Q7Z340 670 aaPredicted RBP1.54□□□□□ -2.16
LMBR1-222ENST00000638959 TRMT2AQ8IZ69 625 aaKnown RBP1.54□□□□□ -2.16
LMBR1-222ENST00000638959 CHST14Q8NCH0 376 aa1.54□□□□□ -2.16
LMBR1-222ENST00000638959 HNRNPLLQ8WVV9 542 aaKnown RBP1.54□□□□□ -2.16
LMBR1-222ENST00000638959 ALG8Q9BVK2 526 aa1.54□□□□□ -2.16
LMBR1-222ENST00000638959 GATA5Q9BWX5 397 aaPredicted RBP1.54□□□□□ -2.16
LMBR1-222ENST00000638959 PLSCR4Q9NRQ2 329 aa1.54□□□□□ -2.16
LMBR1-222ENST00000638959 TOMM22Q9NS69 142 aa1.54□□□□□ -2.16
LMBR1-222ENST00000638959 SERTAD4Q9NUC0 356 aa1.54□□□□□ -2.16
LMBR1-222ENST00000638959 SCAF8Q9UPN6 1271 aaKnown RBP1.54□□□□□ -2.16
LMBR1-222ENST00000638959 PCDHAC2Q9Y5I4 1007 aa1.54□□□□□ -2.16
LMBR1-222ENST00000638959 PTPDC1A2A3K4 754 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 CDHR4A6H8M9 788 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 GSG1L2A8MUP6 293 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 M0R2C6 588 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 DSCR3O14972 297 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 TULP3O75386 442 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 FCER1AP12319 257 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 KCNA6P17658 529 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 CTSSP25774 331 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 HOXD9P28356 352 aaPredicted RBP1.53□□□□□ -2.16
LMBR1-222ENST00000638959 CDC25AP30304 524 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 RANGAP1P46060 587 aaPredicted RBP1.53□□□□□ -2.16
LMBR1-222ENST00000638959 ME1P48163 572 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 MECP2P51608 486 aaKnown RBP1.53□□□□□ -2.16
LMBR1-222ENST00000638959 E2F1Q01094 437 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 SLFN5Q08AF3 891 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 UBE3BQ7Z3V4 1068 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 METTL16Q86W50 562 aaKnown RBP1.53□□□□□ -2.16
LMBR1-222ENST00000638959 ZZZ3Q8IYH5 903 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 FITM2Q8N6M3 262 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 SNX19Q92543 992 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 ORAI2Q96SN7 254 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 ELF4Q99607 663 aaPredicted RBP1.53□□□□□ -2.16
LMBR1-222ENST00000638959 EHD3Q9NZN3 535 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 HEY2Q9UBP5 337 aa1.53□□□□□ -2.16
LMBR1-222ENST00000638959 EVLQ9UI08 416 aaPredicted RBP1.53□□□□□ -2.16
LMBR1-222ENST00000638959 ATRNL1Q5VV63 1379 aa1.52□□□□□ -2.17
LMBR1-222ENST00000638959 TOR1BO14657 336 aa1.52□□□□□ -2.17
LMBR1-222ENST00000638959 JUPP14923 745 aa1.52□□□□□ -2.17
LMBR1-222ENST00000638959 KCNA2P16389 499 aa1.52□□□□□ -2.17
LMBR1-222ENST00000638959 GHRHRQ02643 423 aa1.52□□□□□ -2.17
LMBR1-222ENST00000638959 SP140Q13342 867 aa1.52□□□□□ -2.17
LMBR1-222ENST00000638959 BMPR2Q13873 1038 aa1.52□□□□□ -2.17
LMBR1-222ENST00000638959 CERKLQ49MI3 558 aaPredicted RBP1.52□□□□□ -2.17
LMBR1-222ENST00000638959 PIP4P1Q86T03 277 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms